Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) phd-doc/Fic(toxin)
Location 6152269..6152849 Replicon chromosome
Accession NZ_AP023355
Organism Actinocatenispora thailandica strain NBRC 105041

Toxin (Protein)


Gene name doc Uniprot ID -
Locus tag Athai_RS27545 Protein ID WP_203966327.1
Coordinates 6152490..6152849 (+) Length 120 a.a.

Antitoxin (Protein)


Gene name phd Uniprot ID -
Locus tag Athai_RS27540 Protein ID WP_203964173.1
Coordinates 6152269..6152466 (+) Length 66 a.a.

Genomic Context

Athai_RS27515Athai_RS27535Athai_RS27540Athai_RS27545Athai_RS27555Athai_RS27560Athai_RS27565Athai_RS27570Athai_RS27520Athai_RS27525Athai_RS27530Athai_RS27550
Location: 6148968..6149591 (624 bp)
Type: Others
Protein ID: WP_203964169.1
Location: 6151772..6152227 (456 bp)
Type: Others
Protein ID: WP_203966325.1
Location: 6152269..6152466 (198 bp)
Type: Antitoxin
Protein ID: WP_203964173.1
Location: 6152490..6152849 (360 bp)
Type: Toxin
Protein ID: WP_203966327.1
Location: 6153469..6154668 (1200 bp)
Type: Others
Protein ID: WP_203964175.1
Location: 6154959..6155303 (345 bp)
Type: Others
Protein ID: WP_203964176.1
Location: 6155264..6155812 (549 bp)
Type: Others
Protein ID: WP_203964177.1
Location: 6155805..6156893 (1089 bp)
Type: Others
Protein ID: WP_203964178.1
Location: 6149686..6150777 (1092 bp)
Type: Others
Protein ID: WP_203964170.1
Location: 6150837..6151388 (552 bp)
Type: Others
Protein ID: WP_203964171.1
Location: 6151391..6151612 (222 bp)
Type: Others
Protein ID: WP_203964172.1
Location: 6152839..6153387 (549 bp)
Type: Others
Protein ID: WP_203964174.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
Athai_RS275156148968..6149591+624WP_203964169.1putative glycolipid-binding domain-containing protein-
Athai_RS275206149686..6150777-1092WP_203964170.1PLP-dependent cysteine synthase family protein-
Athai_RS275256150837..6151388-552WP_203964171.1Clp protease-
Athai_RS275306151391..6151612-222WP_203964172.1helix-turn-helix domain-containing protein-
Athai_RS275356151772..6152227+456WP_203966325.1methylglyoxal synthase-
Athai_RS275406152269..6152466+198WP_203964173.1hypothetical proteinAntitoxin
Athai_RS275456152490..6152849+360WP_203966327.1type II toxin-antitoxin system death-on-curing family toxinToxin
Athai_RS275506152839..6153387-549WP_203964174.1Lrp/AsnC family transcriptional regulator-
Athai_RS275556153469..6154668+1200WP_203964175.14-hydroxyphenylpyruvate dioxygenase-
Athai_RS275606154959..6155303+345WP_203964176.1DUF2510 domain-containing protein-
Athai_RS275656155264..6155812+549WP_203964177.1RDD family protein-
Athai_RS275706155805..6156893+1089WP_203964178.1histidinol-phosphate transaminase-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Death on curing protein

(17-116)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 120 a.a.        Molecular weight: 12426.24 Da        Isoelectric Point: 5.4905

>T37657 WP_203966327.1 NZ_AP023355:6152490-6152849 [Actinocatenispora thailandica]
IEDIVAIASTIAGERIAPRDLGLLASAVARPQASMFGQDAYPDLHVKAAALLHSLAANHAFVDGNKRTALNSAIVFLDIN
GHPLSKPVDIDAMVKLTLAAAQSQLDLAAIADGLRTFTD

Download         Length: 360 bp

>T37657 NZ_AP023355:6152490-6152849 [Actinocatenispora thailandica]
ATCGAGGACATTGTCGCCATCGCGAGCACGATCGCCGGCGAGCGAATCGCGCCACGTGACCTCGGCCTGCTCGCCTCGGC
AGTGGCCCGGCCGCAAGCGAGCATGTTCGGGCAGGATGCCTATCCCGACCTACACGTGAAGGCCGCCGCGCTGCTGCATT
CACTGGCCGCCAACCATGCCTTCGTGGACGGGAACAAGCGCACCGCGCTCAACTCCGCGATCGTGTTCCTCGACATCAAT
GGTCATCCGTTGAGCAAGCCGGTTGACATCGATGCCATGGTGAAGCTGACCCTTGCCGCGGCTCAATCGCAGCTTGATCT
CGCCGCGATCGCCGACGGGCTTCGCACATTCACCGATTGA

Antitoxin


Download         Length: 66 a.a.        Molecular weight: 7272.30 Da        Isoelectric Point: 6.2180

>AT37657 WP_203964173.1 NZ_AP023355:6152269-6152466 [Actinocatenispora thailandica]
MAALNVAFDDDEMDELRRVAEAEGVSMKALVHKATIHSLHERRVQTATKRTVDALAEVNKRLAEL

Download         Length: 198 bp

>AT37657 NZ_AP023355:6152269-6152466 [Actinocatenispora thailandica]
ATGGCAGCACTCAACGTGGCTTTCGACGATGATGAGATGGACGAGCTGCGCCGAGTCGCCGAAGCAGAGGGCGTCAGCAT
GAAGGCCCTGGTGCACAAGGCGACGATTCATTCTCTGCACGAGCGCAGGGTGCAGACGGCGACGAAACGTACGGTCGACG
CGCTGGCCGAGGTGAACAAGCGGCTGGCCGAGCTGTGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References