36658

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) pemIK/MazF(toxin)
Location 253779..254421 Replicon chromosome
Accession NZ_AP022975
Organism Bacillus cereus strain 30040

Toxin (Protein)


Gene name pemK Uniprot ID J8CWW5
Locus tag L6438_RS01435 Protein ID WP_000635963.1
Coordinates 254071..254421 (+) Length 117 a.a.

Antitoxin (Protein)


Gene name pemI Uniprot ID R8I8H2
Locus tag L6438_RS01430 Protein ID WP_000004570.1
Coordinates 253779..254066 (+) Length 96 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
L6438_RS01405 (BC30040_0230) 249095..250057 + 963 WP_236787436.1 UV DNA damage repair endonuclease UvsE -
L6438_RS01410 (BC30040_0231) 250050..250622 - 573 WP_000906926.1 rhomboid family intramembrane serine protease -
L6438_RS01415 (BC30040_0232) 250715..251074 + 360 WP_000635040.1 holo-ACP synthase -
L6438_RS01420 (BC30040_0233) 251231..252181 + 951 WP_236788600.1 outer membrane lipoprotein carrier protein LolA -
L6438_RS01425 (BC30040_0234) 252300..253469 + 1170 WP_000390600.1 alanine racemase -
L6438_RS01430 (BC30040_0235) 253779..254066 + 288 WP_000004570.1 antitoxin EndoAI Antitoxin
L6438_RS01435 (BC30040_0236) 254071..254421 + 351 WP_000635963.1 type II toxin-antitoxin system endoribonuclease NdoA Toxin
L6438_RS01440 (BC30040_0237) 254489..256657 + 2169 WP_236787437.1 Tex family protein -
L6438_RS01445 256715..256831 - 117 WP_001143642.1 cortex morphogenetic protein CmpA -
L6438_RS01450 (BC30040_0238) 257027..257485 + 459 WP_062923611.1 SprT family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(1-113)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 117 a.a.        Molecular weight: 12974.12 Da        Isoelectric Point: 5.7168

>T36658 WP_000635963.1 NZ_AP022975:254071-254421 [Bacillus cereus]
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTVIVAAITAQIQKAKLPTHVEIDAKKYGFERDSVILLEQI
RTIDKQRLTDKITHLDEVMMIRVDEALQISLGLIDF

Download         Length: 351 bp

>T36658 NZ_AP022975:254071-254421 [Bacillus cereus]
TTGATTGTAAAACGCGGCGACGTGTATTTTGCAGACCTTTCCCCAGTTGTTGGTTCTGAGCAAGGAGGCGTTCGTCCGGT
TCTTGTCATTCAAAATGACATCGGAAATCGTTTTAGTCCAACGGTGATTGTAGCGGCTATTACTGCACAGATTCAAAAAG
CGAAATTACCCACTCATGTGGAAATTGATGCGAAAAAGTACGGTTTTGAGAGAGATTCTGTTATTTTACTTGAGCAGATT
CGAACAATCGATAAGCAGCGCTTAACGGACAAAATCACTCACTTAGATGAAGTGATGATGATTCGTGTAGATGAAGCGCT
ACAAATTAGTTTAGGACTAATAGATTTTTAA

Antitoxin


Download         Length: 96 a.a.        Molecular weight: 10780.36 Da        Isoelectric Point: 8.9605

>AT36658 WP_000004570.1 NZ_AP022975:253779-254066 [Bacillus cereus]
VSESSVTTEIVVRLPKQMVTELDGIGKQENKNRHELICQATQLLLRQHKTKKRYQHESMRRGYIEMGKINLGIASEAFLA
EYEAAHTVERLVSGG

Download         Length: 288 bp

>AT36658 NZ_AP022975:253779-254066 [Bacillus cereus]
GTGTCCGAATCAAGTGTAACTACTGAAATCGTGGTTCGGTTGCCAAAGCAAATGGTAACGGAATTGGACGGAATTGGAAA
ACAAGAGAATAAGAATCGCCATGAACTAATTTGCCAGGCAACACAACTGTTATTGCGTCAACATAAGACGAAGAAACGCT
ACCAACATGAATCAATGCGACGTGGGTACATTGAAATGGGAAAAATTAATCTTGGTATTGCATCTGAAGCTTTCTTAGCA
GAGTATGAAGCAGCTCATACAGTAGAACGCTTAGTTAGCGGGGGGTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 4HKE
PDB 7BXY

Antitoxin

Source ID Structure
AlphaFold DB A0A366FY90

References