Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | rlegTA/AbiEii-AbiEi |
Location | 1676241..1677679 | Replicon | chromosome |
Accession | NZ_AP022347 | ||
Organism | Fluviibacter phosphoraccumulans strain ICHIJ1 |
Toxin (Protein)
Gene name | rlegT | Uniprot ID | - |
Locus tag | ICHIJ1_RS08370 | Protein ID | WP_162050167.1 |
Coordinates | 1676840..1677679 (+) | Length | 280 a.a. |
Antitoxin (Protein)
Gene name | rlegA | Uniprot ID | - |
Locus tag | ICHIJ1_RS08365 | Protein ID | WP_162050166.1 |
Coordinates | 1676241..1676843 (+) | Length | 201 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
ICHIJ1_RS08340 | 1671561..1672661 | - | 1101 | WP_162050163.1 | P-type DNA transfer ATPase VirB11 | - |
ICHIJ1_RS08345 | 1672665..1672946 | - | 282 | WP_162050164.1 | hypothetical protein | - |
ICHIJ1_RS08350 | 1672988..1674119 | - | 1132 | Protein_1635 | IS3 family transposase | - |
ICHIJ1_RS08355 | 1674387..1674860 | + | 474 | WP_202930661.1 | tyrosine-type recombinase/integrase | - |
ICHIJ1_RS08360 | 1675129..1676151 | + | 1023 | WP_162050165.1 | hypothetical protein | - |
ICHIJ1_RS08365 | 1676241..1676843 | + | 603 | WP_162050166.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin |
ICHIJ1_RS08370 | 1676840..1677679 | + | 840 | WP_162050167.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin |
ICHIJ1_RS08375 | 1677745..1678062 | - | 318 | WP_162050168.1 | putative addiction module antidote protein | - |
ICHIJ1_RS08380 | 1678055..1678360 | - | 306 | WP_162050169.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
ICHIJ1_RS08385 | 1678714..1679943 | + | 1230 | WP_162050170.1 | IS256 family transposase | - |
ICHIJ1_RS08390 | 1680002..1680376 | + | 375 | WP_162050171.1 | hypothetical protein | - |
ICHIJ1_RS08395 | 1680451..1681779 | + | 1329 | WP_162050172.1 | TolC family protein | - |
ICHIJ1_RS08400 | 1681790..1682350 | + | 561 | WP_162050173.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Integrative and Conjugative Element | - | - | 1674900..1749928 | 75028 | |
- | flank | IS/Tn | - | - | 1678714..1679943 | 1229 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 280 a.a. Molecular weight: 31236.08 Da Isoelectric Point: 4.5766
>T35404 WP_162050167.1 NZ_AP022347:1676840-1677679 [Fluviibacter phosphoraccumulans]
MINRAASVRARLLAKAKAESQDFSLVLTRYGLERLLYRLSVSSNKDNFLLKGALLFDLWFDVPLRPTRDIDLLGFGPAEE
PLVLGAFQEICQIECDDGIEFDLDTLKIEEIRKDANYSGLRISLTGYVDGARCPIQVDIGYGDAVTPAPETAEYPVMLPD
TPVPILRVYPRYTVIAEKLEALIFLGMINTRLKDYFDLWVILTTTELDQNLLGEAITATLVRRKTALPASMPVGLSEEFS
SDAQKIAQWNAFVKKNQLNAPSLDVVVTILRDRFAQFVS
MINRAASVRARLLAKAKAESQDFSLVLTRYGLERLLYRLSVSSNKDNFLLKGALLFDLWFDVPLRPTRDIDLLGFGPAEE
PLVLGAFQEICQIECDDGIEFDLDTLKIEEIRKDANYSGLRISLTGYVDGARCPIQVDIGYGDAVTPAPETAEYPVMLPD
TPVPILRVYPRYTVIAEKLEALIFLGMINTRLKDYFDLWVILTTTELDQNLLGEAITATLVRRKTALPASMPVGLSEEFS
SDAQKIAQWNAFVKKNQLNAPSLDVVVTILRDRFAQFVS
Download Length: 840 bp
>T35404 NZ_AP022347:1676840-1677679 [Fluviibacter phosphoraccumulans]
ATGATCAATCGTGCCGCATCTGTTCGCGCTCGTTTGTTGGCCAAAGCCAAGGCCGAGAGCCAGGATTTCTCATTGGTGCT
AACCCGCTACGGACTTGAGCGTCTGCTATACCGTTTGAGCGTGTCTTCGAACAAAGACAACTTTTTACTCAAGGGTGCTC
TGCTGTTCGATTTGTGGTTCGACGTGCCGCTACGCCCCACCCGCGATATCGATTTGCTTGGGTTTGGTCCAGCCGAAGAG
CCTTTGGTATTGGGAGCGTTTCAGGAGATATGCCAGATTGAGTGCGACGATGGCATTGAGTTTGATCTCGACACCCTGAA
AATCGAGGAAATTCGAAAGGACGCCAATTATTCCGGGCTACGTATCAGTTTGACTGGATACGTCGATGGGGCACGCTGCC
CCATCCAGGTCGACATCGGCTACGGTGACGCCGTAACGCCAGCGCCTGAAACAGCGGAATATCCAGTCATGTTGCCGGAC
ACCCCAGTGCCGATACTTCGGGTCTATCCTCGGTATACGGTCATCGCTGAGAAATTAGAAGCACTGATCTTTCTGGGAAT
GATCAATACCCGACTTAAGGACTATTTCGACTTATGGGTCATTCTCACTACTACTGAGTTAGACCAAAACTTACTCGGTG
AAGCTATTACCGCAACCTTGGTTCGCAGAAAAACGGCGCTTCCAGCATCGATGCCCGTGGGCCTGTCAGAGGAGTTTTCT
TCTGATGCCCAGAAGATCGCCCAGTGGAACGCATTCGTTAAGAAAAACCAGCTCAATGCGCCGAGCCTTGATGTCGTTGT
TACCATTTTGCGCGACAGGTTCGCTCAATTTGTAAGTTAA
ATGATCAATCGTGCCGCATCTGTTCGCGCTCGTTTGTTGGCCAAAGCCAAGGCCGAGAGCCAGGATTTCTCATTGGTGCT
AACCCGCTACGGACTTGAGCGTCTGCTATACCGTTTGAGCGTGTCTTCGAACAAAGACAACTTTTTACTCAAGGGTGCTC
TGCTGTTCGATTTGTGGTTCGACGTGCCGCTACGCCCCACCCGCGATATCGATTTGCTTGGGTTTGGTCCAGCCGAAGAG
CCTTTGGTATTGGGAGCGTTTCAGGAGATATGCCAGATTGAGTGCGACGATGGCATTGAGTTTGATCTCGACACCCTGAA
AATCGAGGAAATTCGAAAGGACGCCAATTATTCCGGGCTACGTATCAGTTTGACTGGATACGTCGATGGGGCACGCTGCC
CCATCCAGGTCGACATCGGCTACGGTGACGCCGTAACGCCAGCGCCTGAAACAGCGGAATATCCAGTCATGTTGCCGGAC
ACCCCAGTGCCGATACTTCGGGTCTATCCTCGGTATACGGTCATCGCTGAGAAATTAGAAGCACTGATCTTTCTGGGAAT
GATCAATACCCGACTTAAGGACTATTTCGACTTATGGGTCATTCTCACTACTACTGAGTTAGACCAAAACTTACTCGGTG
AAGCTATTACCGCAACCTTGGTTCGCAGAAAAACGGCGCTTCCAGCATCGATGCCCGTGGGCCTGTCAGAGGAGTTTTCT
TCTGATGCCCAGAAGATCGCCCAGTGGAACGCATTCGTTAAGAAAAACCAGCTCAATGCGCCGAGCCTTGATGTCGTTGT
TACCATTTTGCGCGACAGGTTCGCTCAATTTGTAAGTTAA
Antitoxin
Download Length: 201 a.a. Molecular weight: 22378.14 Da Isoelectric Point: 10.3044
>AT35404 WP_162050166.1 NZ_AP022347:1676241-1676843 [Fluviibacter phosphoraccumulans]
MKRQAHPVHQLLTQKTLLRPKDAVSSGYSRIYLAQLAKRGALRKVGRGLYASPLRKESEESGLAEVAMKYPRAVVCLLSA
LSVHGLTTQAPHEVWVAVGSKDRAPKMDYPPLRVVRFGGETLTEGSEVKVVEGIPVQITNVPKTIADCFKFRNKIGLDVA
LEALKEAWRDKRVSIDDLWRYAQLCRVQNVMRPYLESLVA
MKRQAHPVHQLLTQKTLLRPKDAVSSGYSRIYLAQLAKRGALRKVGRGLYASPLRKESEESGLAEVAMKYPRAVVCLLSA
LSVHGLTTQAPHEVWVAVGSKDRAPKMDYPPLRVVRFGGETLTEGSEVKVVEGIPVQITNVPKTIADCFKFRNKIGLDVA
LEALKEAWRDKRVSIDDLWRYAQLCRVQNVMRPYLESLVA
Download Length: 603 bp
>AT35404 NZ_AP022347:1676241-1676843 [Fluviibacter phosphoraccumulans]
ATGAAAAGGCAAGCACACCCCGTCCACCAGCTACTGACGCAAAAGACGCTACTCCGTCCCAAAGACGCGGTATCAAGCGG
CTATTCGCGTATTTATCTGGCTCAGCTGGCCAAACGTGGTGCACTACGTAAGGTCGGCCGAGGGCTGTATGCCTCCCCGC
TGCGCAAAGAGTCAGAAGAGTCCGGCCTCGCCGAAGTGGCCATGAAATATCCACGGGCCGTTGTCTGCCTGCTGTCTGCC
CTGTCTGTTCATGGGCTCACAACCCAGGCACCCCACGAAGTATGGGTGGCCGTGGGTAGTAAGGATCGCGCCCCAAAAAT
GGATTATCCACCTCTCCGAGTCGTTCGCTTCGGAGGAGAAACACTAACAGAGGGGTCCGAGGTGAAGGTGGTTGAGGGCA
TCCCTGTTCAAATCACCAATGTTCCCAAGACGATTGCAGATTGCTTCAAGTTCCGCAACAAGATTGGCCTGGACGTAGCA
CTGGAAGCGCTGAAGGAGGCTTGGCGGGATAAGCGCGTCAGCATCGATGATCTGTGGCGTTACGCACAGCTATGTCGCGT
ACAGAATGTCATGCGCCCCTACCTTGAAAGCCTGGTCGCATGA
ATGAAAAGGCAAGCACACCCCGTCCACCAGCTACTGACGCAAAAGACGCTACTCCGTCCCAAAGACGCGGTATCAAGCGG
CTATTCGCGTATTTATCTGGCTCAGCTGGCCAAACGTGGTGCACTACGTAAGGTCGGCCGAGGGCTGTATGCCTCCCCGC
TGCGCAAAGAGTCAGAAGAGTCCGGCCTCGCCGAAGTGGCCATGAAATATCCACGGGCCGTTGTCTGCCTGCTGTCTGCC
CTGTCTGTTCATGGGCTCACAACCCAGGCACCCCACGAAGTATGGGTGGCCGTGGGTAGTAAGGATCGCGCCCCAAAAAT
GGATTATCCACCTCTCCGAGTCGTTCGCTTCGGAGGAGAAACACTAACAGAGGGGTCCGAGGTGAAGGTGGTTGAGGGCA
TCCCTGTTCAAATCACCAATGTTCCCAAGACGATTGCAGATTGCTTCAAGTTCCGCAACAAGATTGGCCTGGACGTAGCA
CTGGAAGCGCTGAAGGAGGCTTGGCGGGATAAGCGCGTCAGCATCGATGATCTGTGGCGTTACGCACAGCTATGTCGCGT
ACAGAATGTCATGCGCCCCTACCTTGAAAGCCTGGTCGCATGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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