Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | slvAT/RES(toxin) |
Location | 1081418..1082343 | Replicon | chromosome |
Accession | NZ_AP022347 | ||
Organism | Fluviibacter phosphoraccumulans strain ICHIJ1 |
Toxin (Protein)
Gene name | slvT | Uniprot ID | - |
Locus tag | ICHIJ1_RS05515 | Protein ID | WP_202930692.1 |
Coordinates | 1081861..1082343 (+) | Length | 161 a.a. |
Antitoxin (Protein)
Gene name | slvA | Uniprot ID | - |
Locus tag | ICHIJ1_RS05510 | Protein ID | WP_162049659.1 |
Coordinates | 1081418..1081825 (+) | Length | 136 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
ICHIJ1_RS05495 | 1076919..1077971 | + | 1053 | WP_162049656.1 | ATP-binding protein | - |
ICHIJ1_RS05500 | 1077949..1080480 | + | 2532 | WP_162049657.1 | S8 family peptidase | - |
ICHIJ1_RS05505 | 1080487..1081347 | + | 861 | WP_162049658.1 | hypothetical protein | - |
ICHIJ1_RS05510 | 1081418..1081825 | + | 408 | WP_162049659.1 | MbcA/ParS/Xre antitoxin family protein | Antitoxin |
ICHIJ1_RS05515 | 1081861..1082343 | + | 483 | WP_202930692.1 | RES family NAD+ phosphorylase | Toxin |
ICHIJ1_RS05520 | 1082356..1082664 | + | 309 | WP_162049661.1 | HigA family addiction module antidote protein | - |
ICHIJ1_RS05525 | 1082807..1082998 | + | 192 | WP_162049662.1 | hypothetical protein | - |
ICHIJ1_RS05530 | 1082970..1083362 | + | 393 | WP_162049663.1 | hypothetical protein | - |
ICHIJ1_RS05535 | 1083442..1085400 | + | 1959 | WP_162049664.1 | ATP-binding protein | - |
ICHIJ1_RS05540 | 1085451..1086692 | + | 1242 | WP_162049665.1 | hypothetical protein | - |
ICHIJ1_RS05545 | 1086739..1087086 | + | 348 | WP_162049666.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Genomic island | - | gmd / fcl | 1058849..1102748 | 43899 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 161 a.a. Molecular weight: 17073.12 Da Isoelectric Point: 4.4067
>T35397 WP_202930692.1 NZ_AP022347:1081861-1082343 [Fluviibacter phosphoraccumulans]
MHAPKWAVAPTSGAGAGKHGGRANRPGIDAIYLALETQTAINEYQQTSTLLPPGTLTSYKLSAAPVVDFTGGYSASVWEP
IWEDFYCDWRELWFNQGVEPPSWIAADLALAAGAKGILFSSRLAAGGTNLVLFNSSLVAPDFLDVYDPGNALPQNQASWS
MHAPKWAVAPTSGAGAGKHGGRANRPGIDAIYLALETQTAINEYQQTSTLLPPGTLTSYKLSAAPVVDFTGGYSASVWEP
IWEDFYCDWRELWFNQGVEPPSWIAADLALAAGAKGILFSSRLAAGGTNLVLFNSSLVAPDFLDVYDPGNALPQNQASWS
Download Length: 483 bp
>T35397 NZ_AP022347:1081861-1082343 [Fluviibacter phosphoraccumulans]
ATGCACGCTCCCAAGTGGGCTGTTGCACCTACCAGCGGTGCTGGAGCTGGTAAACATGGTGGCCGTGCCAATCGGCCAGG
TATTGATGCCATTTATTTGGCGCTAGAGACTCAGACGGCTATTAATGAGTACCAACAGACTTCAACTTTGTTGCCACCCG
GCACGTTAACCAGTTACAAATTGTCTGCCGCGCCCGTTGTAGATTTTACCGGCGGGTACAGCGCCTCGGTATGGGAGCCA
ATTTGGGAAGACTTCTACTGCGACTGGCGCGAGCTCTGGTTTAATCAGGGGGTCGAGCCTCCTAGCTGGATTGCAGCAGA
TTTGGCTTTAGCTGCGGGTGCAAAGGGGATTCTCTTTTCTTCGCGGTTAGCTGCTGGCGGAACGAATCTCGTGCTGTTTA
ATAGCTCGCTGGTCGCTCCTGATTTCTTAGACGTTTATGATCCGGGTAATGCTTTGCCACAGAACCAGGCGTCATGGTCT
TGA
ATGCACGCTCCCAAGTGGGCTGTTGCACCTACCAGCGGTGCTGGAGCTGGTAAACATGGTGGCCGTGCCAATCGGCCAGG
TATTGATGCCATTTATTTGGCGCTAGAGACTCAGACGGCTATTAATGAGTACCAACAGACTTCAACTTTGTTGCCACCCG
GCACGTTAACCAGTTACAAATTGTCTGCCGCGCCCGTTGTAGATTTTACCGGCGGGTACAGCGCCTCGGTATGGGAGCCA
ATTTGGGAAGACTTCTACTGCGACTGGCGCGAGCTCTGGTTTAATCAGGGGGTCGAGCCTCCTAGCTGGATTGCAGCAGA
TTTGGCTTTAGCTGCGGGTGCAAAGGGGATTCTCTTTTCTTCGCGGTTAGCTGCTGGCGGAACGAATCTCGTGCTGTTTA
ATAGCTCGCTGGTCGCTCCTGATTTCTTAGACGTTTATGATCCGGGTAATGCTTTGCCACAGAACCAGGCGTCATGGTCT
TGA
Antitoxin
Download Length: 136 a.a. Molecular weight: 15008.97 Da Isoelectric Point: 7.2772
>AT35397 WP_162049659.1 NZ_AP022347:1081418-1081825 [Fluviibacter phosphoraccumulans]
MTATLVQKSKALSCGFDGFIDFLHDQEAGPSTLSPKRFGDVLKIDLQTLATQAHVHRNTITRAPASESVQKYLREALRVL
RAANDLSGDVTRAIFWYRNEPLPPFRYKTAEQLVSEGRTEDVLRYVESLEAGAAG
MTATLVQKSKALSCGFDGFIDFLHDQEAGPSTLSPKRFGDVLKIDLQTLATQAHVHRNTITRAPASESVQKYLREALRVL
RAANDLSGDVTRAIFWYRNEPLPPFRYKTAEQLVSEGRTEDVLRYVESLEAGAAG
Download Length: 408 bp
>AT35397 NZ_AP022347:1081418-1081825 [Fluviibacter phosphoraccumulans]
ATGACCGCAACACTCGTACAGAAATCCAAGGCCTTAAGCTGTGGTTTTGATGGTTTCATCGATTTTTTGCATGATCAGGA
AGCGGGGCCTTCTACCTTGTCGCCCAAGCGCTTTGGTGATGTGCTCAAGATAGATTTGCAGACGCTTGCAACGCAGGCGC
ATGTTCATCGCAATACCATCACCCGTGCGCCAGCATCTGAAAGCGTGCAGAAGTATCTGCGAGAGGCATTGCGCGTTCTG
CGTGCTGCCAATGATTTATCTGGTGACGTAACACGTGCCATCTTCTGGTATCGCAACGAGCCTTTGCCGCCGTTTCGGTA
TAAGACCGCTGAGCAATTGGTCTCTGAAGGGCGTACCGAAGATGTGCTGCGCTATGTTGAGTCGCTGGAAGCTGGTGCCG
CCGGGTGA
ATGACCGCAACACTCGTACAGAAATCCAAGGCCTTAAGCTGTGGTTTTGATGGTTTCATCGATTTTTTGCATGATCAGGA
AGCGGGGCCTTCTACCTTGTCGCCCAAGCGCTTTGGTGATGTGCTCAAGATAGATTTGCAGACGCTTGCAACGCAGGCGC
ATGTTCATCGCAATACCATCACCCGTGCGCCAGCATCTGAAAGCGTGCAGAAGTATCTGCGAGAGGCATTGCGCGTTCTG
CGTGCTGCCAATGATTTATCTGGTGACGTAACACGTGCCATCTTCTGGTATCGCAACGAGCCTTTGCCGCCGTTTCGGTA
TAAGACCGCTGAGCAATTGGTCTCTGAAGGGCGTACCGAAGATGTGCTGCGCTATGTTGAGTCGCTGGAAGCTGGTGCCG
CCGGGTGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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