Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-YafN
Location 327307..327868 Replicon chromosome
Accession NZ_AP022347
Organism Fluviibacter phosphoraccumulans strain ICHIJ1

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag ICHIJ1_RS01720 Protein ID WP_162049012.1
Coordinates 327307..327612 (-) Length 102 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag ICHIJ1_RS01725 Protein ID WP_162049013.1
Coordinates 327617..327868 (-) Length 84 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ICHIJ1_RS01690 322558..323598 - 1041 WP_162049006.1 glycosyltransferase family 9 protein -
ICHIJ1_RS01695 323639..324697 + 1059 WP_162049007.1 glycosyltransferase family 9 protein -
ICHIJ1_RS01700 324683..325024 - 342 WP_162049008.1 type II toxin-antitoxin system RelE/ParE family toxin -
ICHIJ1_RS01705 325021..325296 - 276 WP_162049009.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
ICHIJ1_RS01710 325357..326703 - 1347 WP_162049010.1 type II toxin-antitoxin system HipA family toxin YjjJ -
ICHIJ1_RS01715 326994..327236 - 243 WP_162049011.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
ICHIJ1_RS01720 327307..327612 - 306 WP_162049012.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
ICHIJ1_RS01725 327617..327868 - 252 WP_162049013.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin
ICHIJ1_RS01730 328221..328919 - 699 WP_162049014.1 toll/interleukin-1 receptor domain-containing protein -
ICHIJ1_RS01735 329376..329966 + 591 WP_162049015.1 GNAT family N-acetyltransferase -
ICHIJ1_RS01740 330148..330714 - 567 WP_202930727.1 hypothetical protein -
ICHIJ1_RS01745 330711..332015 - 1305 WP_162049016.1 dNTP triphosphohydrolase -
ICHIJ1_RS01750 332167..332598 - 432 WP_162049017.1 transcriptional regulator -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(6-84)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(9-70)


Sequences

Toxin        


Download         Length: 102 a.a.        Molecular weight: 11449.62 Da        Isoelectric Point: 10.2841

>T35392 WP_162049012.1 NZ_AP022347:c327612-327307 [Fluviibacter phosphoraccumulans]
VAYRLQFLPEALKEWEALDGSIKAPLRAALKKRLENPHVPSAVLGSELAGCYKIKLRKQGYRLVYVVEDDVLVVIVLAIG
KRERLATYEYALKRLITKRVG

Download         Length: 306 bp

>T35392 NZ_AP022347:c327612-327307 [Fluviibacter phosphoraccumulans]
GTGGCTTACCGCCTGCAGTTTCTGCCCGAGGCTTTGAAAGAGTGGGAGGCGCTCGATGGCAGTATCAAAGCGCCACTCCG
AGCTGCCCTGAAAAAACGGCTGGAGAATCCACACGTCCCGAGTGCGGTGCTTGGATCAGAACTTGCTGGTTGCTACAAAA
TCAAACTTCGCAAGCAAGGGTATCGCCTCGTCTACGTGGTTGAAGATGATGTTCTAGTAGTAATTGTGCTGGCCATCGGC
AAACGAGAGCGGCTGGCTACTTACGAGTATGCCCTTAAGCGGTTGATAACGAAGCGGGTTGGGTAG

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9397.70 Da        Isoelectric Point: 4.7335

>AT35392 WP_162049013.1 NZ_AP022347:c327868-327617 [Fluviibacter phosphoraccumulans]
MDTIYADYSVSMSEFKKNPAQVLRTAGEKPVAVLSHNRPAFYMVTPQLFESLVEELADHDLIDIVRDRLTRKTTAVDVDI
NSI

Download         Length: 252 bp

>AT35392 NZ_AP022347:c327868-327617 [Fluviibacter phosphoraccumulans]
ATGGATACCATTTACGCAGATTACTCAGTGAGCATGTCCGAGTTCAAGAAGAACCCGGCTCAAGTGCTGCGCACCGCAGG
TGAAAAGCCCGTGGCAGTTTTGAGCCATAACCGCCCTGCTTTTTACATGGTGACGCCACAGCTATTTGAATCTCTGGTTG
AAGAGCTGGCTGATCACGATTTGATCGACATCGTTCGAGATCGCTTAACGCGCAAAACCACAGCCGTCGACGTCGACATC
AACAGTATTTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References