Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/RelE(toxin) |
| Location | 423041..423518 | Replicon | chromosome |
| Accession | NZ_AP022322 | ||
| Organism | Veillonella sp. S12025-13 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | - |
| Locus tag | KJS32_RS01855 | Protein ID | WP_024064148.1 |
| Coordinates | 423252..423518 (+) | Length | 89 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | E4LDZ1 |
| Locus tag | KJS32_RS01850 | Protein ID | WP_009352129.1 |
| Coordinates | 423041..423262 (+) | Length | 74 a.a. |
Genomic Context
Location: 419281..420171 (891 bp)
Type: Others
Protein ID: WP_024064152.1
Type: Others
Protein ID: WP_024064152.1
Location: 420214..421110 (897 bp)
Type: Others
Protein ID: WP_213467685.1
Type: Others
Protein ID: WP_213467685.1
Location: 421097..421915 (819 bp)
Type: Others
Protein ID: WP_213467686.1
Type: Others
Protein ID: WP_213467686.1
Location: 421915..422658 (744 bp)
Type: Others
Protein ID: WP_213467687.1
Type: Others
Protein ID: WP_213467687.1
Location: 423041..423262 (222 bp)
Type: Antitoxin
Protein ID: WP_009352129.1
Type: Antitoxin
Protein ID: WP_009352129.1
Location: 423252..423518 (267 bp)
Type: Toxin
Protein ID: WP_024064148.1
Type: Toxin
Protein ID: WP_024064148.1
Location: 423529..423741 (213 bp)
Type: Others
Protein ID: WP_024064147.1
Type: Others
Protein ID: WP_024064147.1
Location: 423808..424893 (1086 bp)
Type: Others
Protein ID: WP_024064146.1
Type: Others
Protein ID: WP_024064146.1
Location: 426019..426822 (804 bp)
Type: Others
Protein ID: WP_213467689.1
Type: Others
Protein ID: WP_213467689.1
Location: 426834..427772 (939 bp)
Type: Others
Protein ID: WP_213467690.1
Type: Others
Protein ID: WP_213467690.1
Location: 424987..425778 (792 bp)
Type: Others
Protein ID: WP_213467688.1
Type: Others
Protein ID: WP_213467688.1
Loading, please wait
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJS32_RS01830 (VEIS1202513_03660) | 419281..420171 | + | 891 | WP_024064152.1 | phosphate ABC transporter substrate-binding protein | - |
| KJS32_RS01835 (VEIS1202513_03670) | 420214..421110 | + | 897 | WP_213467685.1 | phosphate ABC transporter permease subunit PstC | - |
| KJS32_RS01840 (VEIS1202513_03680) | 421097..421915 | + | 819 | WP_213467686.1 | ABC transporter permease subunit | - |
| KJS32_RS01845 (VEIS1202513_03690) | 421915..422658 | + | 744 | WP_213467687.1 | ATP-binding cassette domain-containing protein | - |
| KJS32_RS01850 (VEIS1202513_03700) | 423041..423262 | + | 222 | WP_009352129.1 | DUF6290 family protein | Antitoxin |
| KJS32_RS01855 (VEIS1202513_03710) | 423252..423518 | + | 267 | WP_024064148.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| KJS32_RS01860 (VEIS1202513_03720) | 423529..423741 | + | 213 | WP_024064147.1 | hypothetical protein | - |
| KJS32_RS01865 (VEIS1202513_03730) | 423808..424893 | + | 1086 | WP_024064146.1 | hypothetical protein | - |
| KJS32_RS01870 (VEIS1202513_03740) | 424987..425778 | - | 792 | WP_213467688.1 | carbon-nitrogen family hydrolase | - |
| KJS32_RS01875 (VEIS1202513_03750) | 426019..426822 | + | 804 | WP_213467689.1 | polysaccharide deacetylase family protein | - |
| KJS32_RS01880 (VEIS1202513_03760) | 426834..427772 | + | 939 | WP_213467690.1 | phosphodiester glycosidase family protein | - |
Associated MGEs
Loading, please wait
MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| No matching records found | |||||||
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 89 a.a. Molecular weight: 10595.25 Da Isoelectric Point: 10.2849
>T35319 WP_024064148.1 NZ_AP022322:423252-423518 [Veillonella sp. S12025-13]
MAYKLEFSKRFDKQFSKLDKSMQRYLFNWLIKNIDNVENPRYSGKSLTGNKTGLWRYRIGNYRVIADINDDRCIILALEV
GHRKEIYK
MAYKLEFSKRFDKQFSKLDKSMQRYLFNWLIKNIDNVENPRYSGKSLTGNKTGLWRYRIGNYRVIADINDDRCIILALEV
GHRKEIYK
Download Length: 267 bp
>T35319 NZ_AP022322:423252-423518 [Veillonella sp. S12025-13]
ATGGCTTATAAACTTGAATTTTCTAAAAGGTTTGACAAGCAATTTTCTAAATTAGATAAATCAATGCAACGCTATCTTTT
TAATTGGCTCATAAAAAATATAGATAATGTAGAAAACCCTAGGTACTCAGGCAAATCATTGACGGGGAATAAAACAGGGC
TGTGGCGTTATCGCATTGGTAATTATAGAGTCATAGCTGATATTAATGATGATAGATGTATTATTTTAGCGTTAGAAGTG
GGTCATCGAAAAGAAATTTACAAATAG
ATGGCTTATAAACTTGAATTTTCTAAAAGGTTTGACAAGCAATTTTCTAAATTAGATAAATCAATGCAACGCTATCTTTT
TAATTGGCTCATAAAAAATATAGATAATGTAGAAAACCCTAGGTACTCAGGCAAATCATTGACGGGGAATAAAACAGGGC
TGTGGCGTTATCGCATTGGTAATTATAGAGTCATAGCTGATATTAATGATGATAGATGTATTATTTTAGCGTTAGAAGTG
GGTCATCGAAAAGAAATTTACAAATAG
Antitoxin
Download Length: 74 a.a. Molecular weight: 8500.65 Da Isoelectric Point: 4.1835
>AT35319 WP_009352129.1 NZ_AP022322:423041-423262 [Veillonella sp. S12025-13]
MANISVRLNEQEEELFKTYAEFMDETLSTLFKKALLEKIEDEFDLKVGQKALAEYEQDPVTYSVAEMRAKYGL
MANISVRLNEQEEELFKTYAEFMDETLSTLFKKALLEKIEDEFDLKVGQKALAEYEQDPVTYSVAEMRAKYGL
Download Length: 222 bp
>AT35319 NZ_AP022322:423041-423262 [Veillonella sp. S12025-13]
ATGGCAAATATTTCAGTCCGTTTAAATGAACAAGAAGAAGAGTTATTTAAAACCTATGCTGAGTTTATGGATGAAACACT
TTCTACCCTCTTTAAGAAGGCTTTACTAGAAAAGATTGAAGACGAATTTGATCTTAAGGTAGGTCAAAAAGCATTAGCAG
AATACGAGCAAGATCCAGTTACCTATTCTGTAGCGGAAATGCGTGCAAAATATGGCTTATAA
ATGGCAAATATTTCAGTCCGTTTAAATGAACAAGAAGAAGAGTTATTTAAAACCTATGCTGAGTTTATGGATGAAACACT
TTCTACCCTCTTTAAGAAGGCTTTACTAGAAAAGATTGAAGACGAATTTGATCTTAAGGTAGGTCAAAAAGCATTAGCAG
AATACGAGCAAGATCCAGTTACCTATTCTGTAGCGGAAATGCGTGCAAAATATGGCTTATAA
Structures
Toxin
Loading, please wait
Source | ID | Structure |
|---|---|---|
| No matching records found | ||
Antitoxin
Loading, please wait
Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A2S7YYS4 |