Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | tacAT/ElaA-DUF1778 |
| Location | 159296..160035 | Replicon | plasmid pGSH0205-8M-1-1 |
| Accession | NZ_AP019670 | ||
| Organism | Raoultella ornithinolytica strain GSH0205-8M-1 | ||
Toxin (Protein)
| Gene name | tacT | Uniprot ID | - |
| Locus tag | QMG92_RS26735 | Protein ID | WP_076752153.1 |
| Coordinates | 159550..160035 (+) | Length | 162 a.a. |
Antitoxin (Protein)
| Gene name | tacA | Uniprot ID | A0A5E1AWX8 |
| Locus tag | QMG92_RS26730 | Protein ID | WP_012540086.1 |
| Coordinates | 159296..159562 (+) | Length | 89 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMG92_RS26700 (ROGSH02058M1_p11680) | 154526..155062 | - | 537 | WP_013087166.1 | GNAT family N-acetyltransferase | - |
| QMG92_RS26705 (ROGSH02058M1_p11690) | 155187..156944 | - | 1758 | WP_137055842.1 | arsenical pump-driving ATPase | - |
| QMG92_RS26710 (ROGSH02058M1_p11700) | 156965..157327 | - | 363 | WP_013087168.1 | arsenic metallochaperone ArsD family protein | - |
| QMG92_RS26715 (ROGSH02058M1_p11710) | 157403..157948 | - | 546 | WP_047365773.1 | sigma-70 family RNA polymerase sigma factor | - |
| QMG92_RS26720 (ROGSH02058M1_p11720) | 157957..158670 | - | 714 | WP_013087170.1 | arsenical resistance protein ArsH | - |
| QMG92_RS26725 (ROGSH02058M1_p11730) | 158672..158995 | - | 324 | WP_013087171.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| QMG92_RS26730 (ROGSH02058M1_p11740) | 159296..159562 | + | 267 | WP_012540086.1 | DUF1778 domain-containing protein | Antitoxin |
| QMG92_RS26735 (ROGSH02058M1_p11750) | 159550..160035 | + | 486 | WP_076752153.1 | GNAT family N-acetyltransferase | Toxin |
| QMG92_RS26740 (ROGSH02058M1_p11760) | 160319..160471 | + | 153 | WP_223526259.1 | DUF5431 family protein | - |
| QMG92_RS26745 | 160416..160535 | + | 120 | WP_223156217.1 | type I toxin-antitoxin system Hok family toxin | - |
| QMG92_RS26750 (ROGSH02058M1_p11770) | 161394..161720 | + | 327 | WP_076752150.1 | hypothetical protein | - |
| QMG92_RS26755 (ROGSH02058M1_p11780) | 161828..162040 | + | 213 | WP_076752148.1 | hypothetical protein | - |
| QMG92_RS26760 (ROGSH02058M1_p11790) | 162190..162501 | + | 312 | WP_076752146.1 | type II toxin-antitoxin system HigB family toxin | - |
| QMG92_RS26765 (ROGSH02058M1_p11800) | 162498..162914 | + | 417 | WP_076752145.1 | helix-turn-helix domain-containing protein | - |
| QMG92_RS26770 (ROGSH02058M1_p11820) | 163804..164076 | + | 273 | WP_137055850.1 | hypothetical protein | - |
| QMG92_RS26775 (ROGSH02058M1_p11830) | 164179..164526 | + | 348 | WP_076752140.1 | hypothetical protein | - |
| QMG92_RS26780 (ROGSH02058M1_p11840) | 164615..164845 | + | 231 | WP_076752138.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Non-Mobilizable plasmid | blaNDM-5 | - | 1..241445 | 241445 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 162 a.a. Molecular weight: 17838.68 Da Isoelectric Point: 10.0748
>T32859 WP_076752153.1 NZ_AP019670:159550-160035 [Raoultella ornithinolytica]
VGRVTVPEPLSSFHQVAEFVCGETVLDDWLKQKGLKNQALGSARTFVVCKKDTKQVAGFYSLATGSVNHTEATGNLRRNM
PDPIPVIILARLAVDLSFRGKGLGADLLHDAVLRCYRVAENIGVRAIMVHALTEEAKNFYIHHGFKPSRTQQRTLFLKLP
Q
VGRVTVPEPLSSFHQVAEFVCGETVLDDWLKQKGLKNQALGSARTFVVCKKDTKQVAGFYSLATGSVNHTEATGNLRRNM
PDPIPVIILARLAVDLSFRGKGLGADLLHDAVLRCYRVAENIGVRAIMVHALTEEAKNFYIHHGFKPSRTQQRTLFLKLP
Q
Download Length: 486 bp
>T32859 NZ_AP019670:159550-160035 [Raoultella ornithinolytica]
GTGGGACGTGTAACAGTACCAGAACCTTTATCCAGCTTTCATCAGGTGGCGGAATTCGTTTGCGGTGAAACTGTTCTGGA
TGACTGGTTAAAGCAGAAAGGCCTCAAAAACCAGGCTCTCGGATCGGCCAGAACGTTTGTAGTGTGTAAAAAAGACACGA
AACAAGTAGCCGGTTTTTACTCTCTGGCCACCGGGAGCGTCAACCATACAGAAGCGACAGGCAATCTTCGGCGTAACATG
CCCGATCCCATCCCTGTTATTATACTTGCCCGTCTTGCTGTCGATCTCTCTTTCCGCGGAAAAGGGCTTGGCGCTGATTT
ACTTCATGATGCAGTGCTTCGTTGCTATCGGGTTGCCGAGAATATTGGTGTACGTGCAATCATGGTTCATGCACTCACCG
AAGAAGCTAAAAATTTCTACATTCACCATGGTTTCAAACCATCACGAACTCAGCAACGGACATTATTTCTTAAACTCCCT
CAATAG
GTGGGACGTGTAACAGTACCAGAACCTTTATCCAGCTTTCATCAGGTGGCGGAATTCGTTTGCGGTGAAACTGTTCTGGA
TGACTGGTTAAAGCAGAAAGGCCTCAAAAACCAGGCTCTCGGATCGGCCAGAACGTTTGTAGTGTGTAAAAAAGACACGA
AACAAGTAGCCGGTTTTTACTCTCTGGCCACCGGGAGCGTCAACCATACAGAAGCGACAGGCAATCTTCGGCGTAACATG
CCCGATCCCATCCCTGTTATTATACTTGCCCGTCTTGCTGTCGATCTCTCTTTCCGCGGAAAAGGGCTTGGCGCTGATTT
ACTTCATGATGCAGTGCTTCGTTGCTATCGGGTTGCCGAGAATATTGGTGTACGTGCAATCATGGTTCATGCACTCACCG
AAGAAGCTAAAAATTTCTACATTCACCATGGTTTCAAACCATCACGAACTCAGCAACGGACATTATTTCTTAAACTCCCT
CAATAG
Antitoxin
Download Length: 89 a.a. Molecular weight: 10076.47 Da Isoelectric Point: 4.3721
>AT32859 WP_012540086.1 NZ_AP019670:159296-159562 [Raoultella ornithinolytica]
MKSDVQLNLRAKESQRALIDAAAEILHKSRTDFILEMACQAAENVILDRRVFNFNDEQYAEFIDMLDAPVADDPAIDKLL
ARKPQWDV
MKSDVQLNLRAKESQRALIDAAAEILHKSRTDFILEMACQAAENVILDRRVFNFNDEQYAEFIDMLDAPVADDPAIDKLL
ARKPQWDV
Download Length: 267 bp
>AT32859 NZ_AP019670:159296-159562 [Raoultella ornithinolytica]
ATGAAATCAGATGTTCAACTTAATCTTAGAGCAAAGGAATCACAGCGGGCGCTCATTGATGCTGCTGCGGAAATTCTTCA
CAAATCACGAACAGACTTCATCCTGGAAATGGCCTGTCAGGCCGCTGAGAACGTGATCCTCGATCGCCGGGTCTTTAATT
TTAACGATGAACAATATGCCGAATTCATCGACATGCTTGATGCCCCTGTTGCAGATGATCCTGCCATAGATAAACTGCTG
GCAAGGAAACCTCAGTGGGACGTGTAA
ATGAAATCAGATGTTCAACTTAATCTTAGAGCAAAGGAATCACAGCGGGCGCTCATTGATGCTGCTGCGGAAATTCTTCA
CAAATCACGAACAGACTTCATCCTGGAAATGGCCTGTCAGGCCGCTGAGAACGTGATCCTCGATCGCCGGGTCTTTAATT
TTAACGATGAACAATATGCCGAATTCATCGACATGCTTGATGCCCCTGTTGCAGATGATCCTGCCATAGATAAACTGCTG
GCAAGGAAACCTCAGTGGGACGTGTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|