Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | tacAT/DUF1778(antitoxin) |
| Location | 56692..57428 | Replicon | plasmid pGSH0205-8M-1-1 |
| Accession | NZ_AP019670 | ||
| Organism | Raoultella ornithinolytica strain GSH0205-8M-1 | ||
Toxin (Protein)
| Gene name | tacT | Uniprot ID | - |
| Locus tag | QMG92_RS26145 | Protein ID | WP_183114670.1 |
| Coordinates | 56692..57174 (-) | Length | 161 a.a. |
Antitoxin (Protein)
| Gene name | tacA | Uniprot ID | L7SZ29 |
| Locus tag | QMG92_RS26150 | Protein ID | WP_003026799.1 |
| Coordinates | 57162..57428 (-) | Length | 89 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMG92_RS26125 (ROGSH02058M1_p10500) | 52403..52807 | - | 405 | WP_064145647.1 | helix-turn-helix domain-containing protein | - |
| QMG92_RS26130 (ROGSH02058M1_p10510) | 52856..54202 | - | 1347 | WP_077267029.1 | ISNCY family transposase | - |
| QMG92_RS26135 (ROGSH02058M1_p10520) | 54428..55060 | + | 633 | WP_001567369.1 | hypothetical protein | - |
| QMG92_RS26140 (ROGSH02058M1_p10530) | 55089..56492 | - | 1404 | WP_001567368.1 | ISNCY-like element ISKpn21 family transposase | - |
| QMG92_RS26145 (ROGSH02058M1_p10540) | 56692..57174 | - | 483 | WP_183114670.1 | GNAT family N-acetyltransferase | Toxin |
| QMG92_RS26150 (ROGSH02058M1_p10550) | 57162..57428 | - | 267 | WP_003026799.1 | DUF1778 domain-containing protein | Antitoxin |
| QMG92_RS26155 (ROGSH02058M1_p10560) | 57604..57858 | - | 255 | WP_009653916.1 | hypothetical protein | - |
| QMG92_RS26160 (ROGSH02058M1_p10570) | 57934..58191 | - | 258 | WP_009653918.1 | hypothetical protein | - |
| QMG92_RS26165 (ROGSH02058M1_p10580) | 58240..58443 | - | 204 | WP_004098931.1 | HHA domain-containing protein | - |
| QMG92_RS26170 (ROGSH02058M1_p10590) | 58477..58845 | - | 369 | WP_183114669.1 | hypothetical protein | - |
| QMG92_RS26175 (ROGSH02058M1_p10600) | 58889..59383 | - | 495 | WP_013023776.1 | hypothetical protein | - |
| QMG92_RS26180 (ROGSH02058M1_p10610) | 59414..59980 | - | 567 | WP_009654312.1 | hypothetical protein | - |
| QMG92_RS26185 (ROGSH02058M1_p10620) | 59977..60240 | - | 264 | WP_009310051.1 | hypothetical protein | - |
| QMG92_RS26190 (ROGSH02058M1_p10630) | 60524..61108 | + | 585 | WP_223862240.1 | hypothetical protein | - |
| QMG92_RS26195 (ROGSH02058M1_p10640) | 61322..62248 | - | 927 | WP_228287669.1 | Abi family protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Non-Mobilizable plasmid | blaNDM-5 | - | 1..241445 | 241445 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 161 a.a. Molecular weight: 17313.02 Da Isoelectric Point: 9.5893
>T32858 WP_183114670.1 NZ_AP019670:c57174-56692 [Raoultella ornithinolytica]
VGCITAPEPLSSAHQLAEFVSGETVLDEWLKQRGLKNQALGAARTFVVCKTGTKQVAGFYSLATGSVNHTEATGSLRRNM
PDPIPVIILARLAVDISLHGKGIGADLLHDAVLRCYRVAENIGVRAIMVHALTEEAKGFYAHHGFKASQTHKRTLFLKLQ
VGCITAPEPLSSAHQLAEFVSGETVLDEWLKQRGLKNQALGAARTFVVCKTGTKQVAGFYSLATGSVNHTEATGSLRRNM
PDPIPVIILARLAVDISLHGKGIGADLLHDAVLRCYRVAENIGVRAIMVHALTEEAKGFYAHHGFKASQTHKRTLFLKLQ
Download Length: 483 bp
>T32858 NZ_AP019670:c57174-56692 [Raoultella ornithinolytica]
GTGGGATGTATAACAGCGCCCGAGCCGTTATCCAGCGCCCATCAACTGGCCGAGTTCGTCAGTGGAGAAACGGTACTCGA
TGAATGGCTAAAACAGAGAGGTTTAAAAAATCAGGCTCTTGGTGCTGCCCGAACGTTCGTTGTTTGCAAGACGGGTACGA
AGCAAGTAGCTGGTTTTTACTCTCTGGCCACCGGTAGCGTTAACCATACGGAAGCGACAGGTAGTCTTCGGCGTAACATG
CCAGATCCTATACCGGTGATTATACTTGCTCGCCTGGCGGTAGATATCTCATTGCACGGAAAAGGGATTGGCGCCGATTT
ACTTCACGATGCGGTTCTACGCTGTTATCGCGTAGCTGAGAATATTGGCGTTCGTGCGATAATGGTTCACGCGCTTACTG
AAGAAGCCAAAGGCTTCTATGCTCACCATGGATTTAAGGCATCGCAAACTCATAAGCGGACTCTGTTCCTTAAACTTCAA
TGA
GTGGGATGTATAACAGCGCCCGAGCCGTTATCCAGCGCCCATCAACTGGCCGAGTTCGTCAGTGGAGAAACGGTACTCGA
TGAATGGCTAAAACAGAGAGGTTTAAAAAATCAGGCTCTTGGTGCTGCCCGAACGTTCGTTGTTTGCAAGACGGGTACGA
AGCAAGTAGCTGGTTTTTACTCTCTGGCCACCGGTAGCGTTAACCATACGGAAGCGACAGGTAGTCTTCGGCGTAACATG
CCAGATCCTATACCGGTGATTATACTTGCTCGCCTGGCGGTAGATATCTCATTGCACGGAAAAGGGATTGGCGCCGATTT
ACTTCACGATGCGGTTCTACGCTGTTATCGCGTAGCTGAGAATATTGGCGTTCGTGCGATAATGGTTCACGCGCTTACTG
AAGAAGCCAAAGGCTTCTATGCTCACCATGGATTTAAGGCATCGCAAACTCATAAGCGGACTCTGTTCCTTAAACTTCAA
TGA
Antitoxin
Download Length: 89 a.a. Molecular weight: 10147.59 Da Isoelectric Point: 4.5256
>AT32858 WP_003026799.1 NZ_AP019670:c57428-57162 [Raoultella ornithinolytica]
MKSDVQLNLRAKESQRALIDAAAEILHKSRTDFILEMACKAAENVILDRRVFNFNDEQYAEFIDMLDAPVEDEPAINKLL
ARKPQWDV
MKSDVQLNLRAKESQRALIDAAAEILHKSRTDFILEMACKAAENVILDRRVFNFNDEQYAEFIDMLDAPVEDEPAINKLL
ARKPQWDV
Download Length: 267 bp
>AT32858 NZ_AP019670:c57428-57162 [Raoultella ornithinolytica]
ATGAAATCAGATGTTCAACTCAACCTAAGAGCTAAAGAGTCTCAGAGGGCACTCATCGATGCCGCTGCAGAAATCCTTCA
TAAATCGCGAACCGACTTCATTCTTGAGATGGCCTGCAAGGCTGCGGAGAACGTGATCCTTGATCGTCGTGTTTTCAATT
TTAACGACGAACAGTATGCAGAGTTCATCGATATGCTCGATGCGCCAGTCGAGGATGAGCCCGCCATTAATAAACTACTG
GCAAGGAAACCTCAGTGGGATGTATAA
ATGAAATCAGATGTTCAACTCAACCTAAGAGCTAAAGAGTCTCAGAGGGCACTCATCGATGCCGCTGCAGAAATCCTTCA
TAAATCGCGAACCGACTTCATTCTTGAGATGGCCTGCAAGGCTGCGGAGAACGTGATCCTTGATCGTCGTGTTTTCAATT
TTAACGACGAACAGTATGCAGAGTTCATCGATATGCTCGATGCGCCAGTCGAGGATGAGCCCGCCATTAATAAACTACTG
GCAAGGAAACCTCAGTGGGATGTATAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|