Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | KacT-ataR/DUF1778(antitoxin) |
| Location | 1671248..1672045 | Replicon | chromosome |
| Accession | NZ_AP019630 | ||
| Organism | Enterobacter asburiae strain 17Nkhm-UP2 | ||
Toxin (Protein)
| Gene name | KacT | Uniprot ID | - |
| Locus tag | FOY94_RS07960 | Protein ID | WP_172620298.1 |
| Coordinates | 1671545..1672045 (+) | Length | 167 a.a. |
Antitoxin (Protein)
| Gene name | ataR | Uniprot ID | - |
| Locus tag | FOY94_RS07955 | Protein ID | WP_023311079.1 |
| Coordinates | 1671248..1671517 (+) | Length | 90 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOY94_RS07925 | 1666875..1667318 | - | 444 | WP_032658095.1 | helix-turn-helix transcriptional regulator | - |
| FOY94_RS07930 | 1667471..1668712 | + | 1242 | WP_048979071.1 | bifunctional glucose-1-phosphatase/inositol phosphatase | - |
| FOY94_RS07935 | 1668746..1668973 | - | 228 | WP_008499832.1 | YccJ family protein | - |
| FOY94_RS07940 | 1668994..1669590 | - | 597 | WP_023311076.1 | NAD(P)H:quinone oxidoreductase | - |
| FOY94_RS07945 | 1669981..1670151 | + | 171 | WP_023311077.1 | general stress protein | - |
| FOY94_RS07950 | 1670269..1671186 | + | 918 | WP_048979072.1 | DMT family transporter | - |
| FOY94_RS07955 | 1671248..1671517 | + | 270 | WP_023311079.1 | DUF1778 domain-containing protein | Antitoxin |
| FOY94_RS07960 | 1671545..1672045 | + | 501 | WP_172620298.1 | GNAT family N-acetyltransferase | Toxin |
| FOY94_RS07965 | 1672119..1673441 | - | 1323 | WP_048979074.1 | pyrimidine utilization transport protein G | - |
| FOY94_RS07970 | 1673463..1673957 | - | 495 | WP_048979075.1 | pyrimidine utilization flavin reductase protein F | - |
| FOY94_RS07975 | 1673967..1674557 | - | 591 | WP_033145164.1 | malonic semialdehyde reductase | - |
| FOY94_RS07980 | 1674567..1675367 | - | 801 | WP_048979076.1 | pyrimidine utilization protein D | - |
| FOY94_RS07985 | 1675375..1675761 | - | 387 | WP_010429508.1 | pyrimidine utilization protein C | - |
| FOY94_RS07990 | 1675773..1676462 | - | 690 | WP_033145167.1 | pyrimidine utilization protein B | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 167 a.a. Molecular weight: 19018.74 Da Isoelectric Point: 7.9108
>T32771 WP_172620298.1 NZ_AP019630:1671545-1672045 [Enterobacter asburiae]
MLSEGTDYDFEYFDCGEPSLNAFLAEHLVRQHNGRILRAYLLKERDRPRVLGYYTLSGSCFERAMLPSKTQQRRIPYINV
PSVTLGRLAVDKTLQGNEWGTTLVAHAMRVVYLASQAVGVHGIFVDALDERAKRFYLKQGFIPLTAENSHSLFFPTKSIE
RLFEQE
MLSEGTDYDFEYFDCGEPSLNAFLAEHLVRQHNGRILRAYLLKERDRPRVLGYYTLSGSCFERAMLPSKTQQRRIPYINV
PSVTLGRLAVDKTLQGNEWGTTLVAHAMRVVYLASQAVGVHGIFVDALDERAKRFYLKQGFIPLTAENSHSLFFPTKSIE
RLFEQE
Download Length: 501 bp
>T32771 NZ_AP019630:1671545-1672045 [Enterobacter asburiae]
ATGTTATCAGAGGGAACCGATTATGACTTCGAGTATTTTGATTGTGGCGAACCCTCGCTAAATGCCTTCCTTGCTGAACA
TCTGGTGCGTCAGCACAATGGGCGTATTTTACGAGCCTACCTGCTTAAAGAGCGCGATCGTCCGCGTGTCCTGGGTTATT
ACACGTTATCGGGAAGCTGTTTTGAAAGAGCGATGCTTCCTTCTAAGACTCAGCAGCGCCGGATCCCTTATATCAACGTA
CCCAGCGTGACGCTGGGACGTCTGGCTGTAGATAAAACCCTACAGGGAAACGAGTGGGGAACAACGCTCGTTGCGCATGC
TATGCGCGTTGTCTACCTGGCTTCACAGGCTGTGGGGGTACACGGAATATTTGTTGATGCCCTTGACGAGCGGGCAAAAC
GATTTTATCTGAAGCAGGGCTTTATCCCGCTGACAGCTGAAAACAGCCATTCTTTGTTCTTCCCTACAAAATCTATCGAA
CGGCTGTTTGAGCAAGAGTGA
ATGTTATCAGAGGGAACCGATTATGACTTCGAGTATTTTGATTGTGGCGAACCCTCGCTAAATGCCTTCCTTGCTGAACA
TCTGGTGCGTCAGCACAATGGGCGTATTTTACGAGCCTACCTGCTTAAAGAGCGCGATCGTCCGCGTGTCCTGGGTTATT
ACACGTTATCGGGAAGCTGTTTTGAAAGAGCGATGCTTCCTTCTAAGACTCAGCAGCGCCGGATCCCTTATATCAACGTA
CCCAGCGTGACGCTGGGACGTCTGGCTGTAGATAAAACCCTACAGGGAAACGAGTGGGGAACAACGCTCGTTGCGCATGC
TATGCGCGTTGTCTACCTGGCTTCACAGGCTGTGGGGGTACACGGAATATTTGTTGATGCCCTTGACGAGCGGGCAAAAC
GATTTTATCTGAAGCAGGGCTTTATCCCGCTGACAGCTGAAAACAGCCATTCTTTGTTCTTCCCTACAAAATCTATCGAA
CGGCTGTTTGAGCAAGAGTGA
Antitoxin
Download Length: 90 a.a. Molecular weight: 10249.72 Da Isoelectric Point: 5.8836
>AT32771 WP_023311079.1 NZ_AP019630:1671248-1671517 [Enterobacter asburiae]
MPALKKQRIDLRLTDEDKTMIEEAAAMTNQTITQFMVNSASERAAEVIEQHRRLVLNEASWTAVMDAIDNPPEPNERLKR
AAKRLRNME
MPALKKQRIDLRLTDEDKTMIEEAAAMTNQTITQFMVNSASERAAEVIEQHRRLVLNEASWTAVMDAIDNPPEPNERLKR
AAKRLRNME
Download Length: 270 bp
>AT32771 NZ_AP019630:1671248-1671517 [Enterobacter asburiae]
ATGCCAGCACTTAAAAAACAGCGTATCGATCTTCGCTTAACGGACGAAGACAAAACAATGATTGAAGAAGCGGCGGCGAT
GACGAACCAAACGATCACCCAGTTTATGGTGAACAGTGCGTCAGAGCGTGCTGCAGAGGTCATCGAGCAGCACCGTCGTC
TCGTATTAAACGAAGCATCATGGACTGCGGTGATGGATGCCATCGACAATCCGCCTGAGCCAAATGAACGCCTGAAACGA
GCAGCAAAACGGCTTCGAAACATGGAGTGA
ATGCCAGCACTTAAAAAACAGCGTATCGATCTTCGCTTAACGGACGAAGACAAAACAATGATTGAAGAAGCGGCGGCGAT
GACGAACCAAACGATCACCCAGTTTATGGTGAACAGTGCGTCAGAGCGTGCTGCAGAGGTCATCGAGCAGCACCGTCGTC
TCGTATTAAACGAAGCATCATGGACTGCGGTGATGGATGCCATCGACAATCCGCCTGAGCCAAATGAACGCCTGAAACGA
GCAGCAAAACGGCTTCGAAACATGGAGTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|
Antitoxin
| Source | ID | Structure |
|---|