32584

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) TscAT/-
Location 2334142..2334671 Replicon chromosome
Accession NZ_AP019305
Organism Staphylococcus aureus strain TUM9458

Toxin (Protein)


Gene name TscT Uniprot ID K7ZRX2
Locus tag EKM72_RS12390 Protein ID WP_001103933.1
Coordinates 2334354..2334671 (+) Length 106 a.a.

Antitoxin (Protein)


Gene name TscA Uniprot ID A0A6B0BJC0
Locus tag EKM72_RS12385 Protein ID WP_001058487.1
Coordinates 2334142..2334351 (+) Length 70 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EKM72_RS12350 2330593..2331057 + 465 WP_001085183.1 SsrA-binding protein SmpB -
EKM72_RS12360 2331620..2332726 - 1107 WP_000121223.1 site-specific integrase -
EKM72_RS12365 2332732..2333379 - 648 WP_072474260.1 helix-turn-helix domain-containing protein -
EKM72_RS12370 2333537..2333743 + 207 WP_001060953.1 hypothetical protein -
EKM72_RS12375 2333779..2334006 + 228 WP_000164237.1 helix-turn-helix domain-containing protein -
EKM72_RS12380 2334003..2334149 + 147 WP_000784893.1 hypothetical protein -
EKM72_RS12385 2334142..2334351 + 210 WP_001058487.1 hypothetical protein Antitoxin
EKM72_RS12390 2334354..2334671 + 318 WP_001103933.1 DUF1474 family protein Toxin
EKM72_RS12395 2334738..2335607 + 870 WP_001002695.1 primase alpha helix C-terminal domain-containing protein -
EKM72_RS12400 2335624..2337093 + 1470 WP_001668899.1 virulence-associated E family protein -
EKM72_RS12410 2337379..2337741 + 363 WP_001039169.1 hypothetical protein -
EKM72_RS12415 2337743..2338027 + 285 WP_000998179.1 hypothetical protein -
EKM72_RS12420 2338024..2338665 + 642 WP_001019810.1 hypothetical protein -
EKM72_RS12425 2339115..2339456 + 342 WP_001190615.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - vWbp 2328199..2373079 44880


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Protein of unknown function DUF1474

(1-98)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 106 a.a.        Molecular weight: 12511.13 Da        Isoelectric Point: 4.6364

>T32584 WP_001103933.1 NZ_AP019305:2334354-2334671 [Staphylococcus aureus]
MNWEIKDLMCDIEVIKEKINDVAIKHGWFVEDKFVKNELETKQEHINFSASYLEHRIQNEHTVELLQVYLKEFGELIQKF
HEIEKASSENFGEESDDAKKLKITE

Download         Length: 318 bp

>T32584 NZ_AP019305:2334354-2334671 [Staphylococcus aureus]
ATGAATTGGGAAATTAAAGATTTGATGTGTGATATTGAAGTGATAAAAGAAAAAATCAATGATGTAGCTATCAAACATGG
TTGGTTTGTTGAAGATAAATTTGTCAAAAATGAATTAGAAACAAAACAGGAACATATTAATTTTTCTGCTAGCTATTTAG
AACATCGTATACAAAATGAACATACAGTTGAGTTATTACAGGTGTACTTAAAAGAATTCGGTGAACTTATACAAAAGTTT
CATGAAATAGAAAAAGCATCATCTGAGAACTTTGGCGAGGAATCAGATGACGCAAAGAAATTAAAAATTACAGAGTAA

Antitoxin


Download         Length: 70 a.a.        Molecular weight: 8228.24 Da        Isoelectric Point: 4.1682

>AT32584 WP_001058487.1 NZ_AP019305:2334142-2334351 [Staphylococcus aureus]
MNNEQKEVIEHVVYQLELSIMNNFESYEHTEYVDGIEVVSEISPEKHLELIMKWCAQELKNNFQLEKGE

Download         Length: 210 bp

>AT32584 NZ_AP019305:2334142-2334351 [Staphylococcus aureus]
ATGAATAATGAACAAAAAGAAGTAATAGAACACGTGGTTTATCAACTTGAGTTAAGTATCATGAATAATTTTGAAAGTTA
TGAACACACGGAATATGTTGATGGTATTGAAGTGGTTTCAGAGATCAGTCCTGAAAAGCACTTAGAATTGATAATGAAAT
GGTGCGCACAAGAATTAAAGAATAATTTTCAATTAGAAAAAGGAGAATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB K7ZRX2

Antitoxin

Source ID Structure
AlphaFold DB A0A6B0BJC0

References