Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yoeB-relB/YoeB-YefM
Location 777917..778419 Replicon chromosome
Accession NZ_AP018718
Organism Sulfuricystis multivorans strain J5B

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag EL335_RS03855 Protein ID WP_126444329.1
Coordinates 778165..778419 (+) Length 85 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag EL335_RS03850 Protein ID WP_126444328.1
Coordinates 777917..778168 (+) Length 84 a.a.

Genomic Context

EL335_RS03835EL335_RS03850EL335_RS03855EL335_RS03830EL335_RS03840EL335_RS03845EL335_RS03860EL335_RS03865EL335_RS03870EL335_RS03875EL335_RS03880EL335_RS03885
Location: 773855..774466 (612 bp)
Type: Others
Protein ID: WP_126444325.1
Location: 777917..778168 (252 bp)
Type: Antitoxin
Protein ID: WP_126444328.1
Location: 778165..778419 (255 bp)
Type: Toxin
Protein ID: WP_126444329.1
Location: 773128..773760 (633 bp)
Type: Others
Protein ID: WP_126444324.1
Location: 774492..775763 (1272 bp)
Type: Others
Protein ID: WP_126444326.1
Location: 775760..777622 (1863 bp)
Type: Others
Protein ID: WP_126444327.1
Location: 778683..779078 (396 bp)
Type: Others
Protein ID: WP_126444330.1
Location: 779075..779857 (783 bp)
Type: Others
Protein ID: WP_284155438.1
Location: 780145..780432 (288 bp)
Type: Others
Protein ID: WP_126444332.1
Location: 780429..781028 (600 bp)
Type: Others
Protein ID: WP_284155439.1
Location: 781025..781741 (717 bp)
Type: Others
Protein ID: WP_126444333.1
Location: 781746..782948 (1203 bp)
Type: Others
Protein ID: WP_172600022.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
EL335_RS03830773128..773760-633WP_126444324.1TetR/AcrR family transcriptional regulator-
EL335_RS03835773855..774466+612WP_126444325.1hypothetical protein-
EL335_RS03840774492..775763-1272WP_126444326.1NnrS family protein-
EL335_RS03845775760..777622-1863WP_126444327.1nitric oxide reductase-
EL335_RS03850777917..778168+252WP_126444328.1type II toxin-antitoxin system prevent-host-death family antitoxinAntitoxin
EL335_RS03855778165..778419+255WP_126444329.1Txe/YoeB family addiction module toxinToxin
EL335_RS03860778683..779078-396WP_126444330.1hypothetical protein-
EL335_RS03865779075..779857-783WP_284155438.1CbbQ/NirQ/NorQ/GpvN family protein-
EL335_RS03870780145..780432-288WP_126444332.1cytochrome C oxidase subunit IV family protein-
EL335_RS03875780429..781028-600WP_284155439.1cytochrome c oxidase subunit 3 family protein-
EL335_RS03880781025..781741-717WP_126444333.1c-type cytochrome-
EL335_RS03885781746..782948-1203WP_172600022.1nitrous oxide reductase family maturation protein NosD-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(5-84)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-74)


Sequences

Toxin        


Download         Length: 85 a.a.        Molecular weight: 10200.71 Da        Isoelectric Point: 9.4385

>T31982 WP_126444329.1 NZ_AP018718:778165-778419 [Sulfuricystis multivorans]
VKLVFADEAWEDYLYWQKQDKKMVERINKLIREIQREPFGGVGKPEPLKHALSGFWSRRITDEHRIVYRVEGDQLQIAQL
RFHY

Download         Length: 255 bp

>T31982 NZ_AP018718:778165-778419 [Sulfuricystis multivorans]
GTGAAGCTGGTCTTCGCAGACGAGGCATGGGAAGACTACCTGTATTGGCAAAAGCAGGATAAAAAAATGGTCGAGCGGAT
CAACAAACTGATTCGCGAGATCCAGCGAGAACCATTCGGCGGCGTCGGAAAACCCGAACCGCTGAAACACGCACTCTCGG
GATTTTGGTCACGCCGGATCACAGACGAGCACCGAATAGTGTATCGGGTTGAAGGCGACCAACTTCAAATAGCCCAATTG
CGTTTCCATTACTGA

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9150.56 Da        Isoelectric Point: 6.9767

>AT31982 WP_126444328.1 NZ_AP018718:777917-778168 [Sulfuricystis multivorans]
MDAITYTTLRANLASAMDRVCDDHEALIITRNGEQSVVMLSLEDYKALEETAYLLRTPANAKRLLTAVAQLNAGKGIERK
LAK

Download         Length: 252 bp

>AT31982 NZ_AP018718:777917-778168 [Sulfuricystis multivorans]
ATGGATGCGATTACCTACACGACGCTTCGCGCGAATTTGGCGAGCGCGATGGATCGAGTCTGCGACGACCACGAAGCCTT
GATTATCACCCGCAACGGAGAGCAGTCGGTTGTGATGCTCTCGCTTGAAGACTATAAGGCGTTGGAAGAAACCGCCTATC
TCTTGCGCACACCCGCGAACGCGAAGCGTCTTCTCACGGCGGTAGCGCAATTGAATGCCGGCAAGGGCATCGAGCGGAAA
CTGGCCAAGTGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References