Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) TacT2-ataR/DUF1778(antitoxin)
Location 733532..734292 Replicon chromosome
Accession NZ_AP017375
Organism Stanieria sp. NIES-3757

Toxin (Protein)


Gene name TacT2 Uniprot ID -
Locus tag STA3757_RS03365 Protein ID WP_096380906.1
Coordinates 733532..734038 (-) Length 169 a.a.

Antitoxin (Protein)


Gene name ataR Uniprot ID -
Locus tag STA3757_RS03370 Protein ID WP_096380910.1
Coordinates 734026..734292 (-) Length 89 a.a.

Genomic Context

STA3757_RS03330STA3757_RS03355STA3757_RS03360STA3757_RS03375STA3757_RS03380STA3757_RS03385STA3757_RS03395STA3757_RS03335STA3757_RS03340STA3757_RS03345STA3757_RS03365STA3757_RS03370
Location: 729516..729605 (90 bp)
Type: Others
Protein ID: Protein_659
Location: 732032..733089 (1058 bp)
Type: Others
Protein ID: Protein_663
Location: 733091..733378 (288 bp)
Type: Others
Protein ID: Protein_664
Location: 734420..735175 (756 bp)
Type: Others
Protein ID: WP_096387733.1
Location: 735580..735816 (237 bp)
Type: Others
Protein ID: WP_096380913.1
Location: 736131..736451 (321 bp)
Type: Others
Protein ID: WP_096380917.1
Location: 737781..738284 (504 bp)
Type: Others
Protein ID: WP_096380920.1
Location: 729776..730702 (927 bp)
Type: Others
Protein ID: WP_096380900.1
Location: 730728..731120 (393 bp)
Type: Others
Protein ID: WP_096387731.1
Location: 731186..731347 (162 bp)
Type: Others
Protein ID: WP_096380903.1
Location: 733532..734038 (507 bp)
Type: Toxin
Protein ID: WP_096380906.1
Location: 734026..734292 (267 bp)
Type: Antitoxin
Protein ID: WP_096380910.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
STA3757_RS03330729516..729605+90Protein_659transposase-
STA3757_RS03335729776..730702-927WP_096380900.1nucleoside hydrolase-
STA3757_RS03340730728..731120-393WP_096387731.1metalloregulator ArsR/SmtB family transcription factor-
STA3757_RS03345731186..731347-162WP_096380903.1metallothionein-
STA3757_RS03355732032..733089+1058Protein_663IS4 family transposase-
STA3757_RS03360733091..733378+288Protein_664IS4 family transposase-
STA3757_RS03365733532..734038-507WP_096380906.1GNAT family N-acetyltransferaseToxin
STA3757_RS03370734026..734292-267WP_096380910.1DUF1778 domain-containing proteinAntitoxin
STA3757_RS03375734420..735175+756WP_096387733.1IS982 family transposase-
STA3757_RS03380735580..735816+237WP_096380913.1hypothetical protein-
STA3757_RS03385736131..736451+321WP_096380917.1hypothetical protein-
STA3757_RS03395737781..738284+504WP_096380920.1DNA recombination-mediator protein A-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(53-146)

Antitoxin

Vibrio phage ICP1, Orf50

(4-88)


Sequences

Toxin        


Download         Length: 169 a.a.        Molecular weight: 18463.37 Da        Isoelectric Point: 7.7464

>T31098 WP_096380906.1 NZ_AP017375:c734038-733532 [Stanieria sp. NIES-3757]
MGTVNYSPPQRISSEHIITDFDCGEESLNEWLKKRALKNDVADASRTYVVCCDNVVVAYYSLHLGCVQHSEAVGKIKRNM
PDPIPAIVLGRLAVDVNHQGQGLAHDLMKDMFLRAIAVSDLAGTKAVLVKALNDKVSTFYQSFGFIQSKTDPLLLMKAVA
EVKASLKQ

Download         Length: 507 bp

>T31098 NZ_AP017375:c734038-733532 [Stanieria sp. NIES-3757]
TTGGGAACAGTAAACTATTCACCACCGCAACGCATTTCTTCAGAGCATATTATTACAGACTTCGATTGTGGTGAAGAATC
ACTCAATGAATGGCTGAAGAAACGTGCGCTTAAAAATGACGTAGCAGATGCTAGTAGAACCTATGTTGTCTGCTGTGACA
ATGTAGTAGTAGCGTATTATTCGCTTCACCTAGGTTGTGTTCAACATTCCGAAGCAGTAGGGAAAATTAAACGTAATATG
CCCGATCCTATACCCGCTATCGTTTTAGGTAGGTTAGCGGTTGATGTTAATCATCAAGGTCAAGGATTAGCTCACGACTT
GATGAAAGATATGTTTCTTAGAGCCATTGCGGTTTCGGATTTGGCTGGTACTAAAGCAGTGTTGGTTAAAGCTCTTAATG
ATAAGGTAAGTACTTTTTATCAGTCTTTTGGGTTCATACAGTCTAAAACTGACCCGCTTTTATTAATGAAAGCAGTAGCT
GAAGTTAAAGCTAGCTTAAAACAATAA

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 10418.85 Da        Isoelectric Point: 4.9167

>AT31098 WP_096380910.1 NZ_AP017375:c734292-734026 [Stanieria sp. NIES-3757]
MGAMQKQKVVNLRVEESRQNLIDEAARLQGKSRTEFMIEAAYKEAEQTILDQKIFILDEADYEYLTRTDHQADPKLVKLF
ERKSLWEQ

Download         Length: 267 bp

>AT31098 NZ_AP017375:c734292-734026 [Stanieria sp. NIES-3757]
ATGGGAGCTATGCAGAAACAAAAAGTAGTCAACCTCAGAGTTGAAGAAAGCAGACAAAATCTAATAGATGAAGCAGCAAG
GCTTCAAGGTAAATCTCGCACTGAGTTTATGATAGAAGCTGCTTACAAAGAAGCCGAACAAACTATCTTAGACCAAAAGA
TTTTTATTCTAGATGAAGCTGACTATGAGTATCTGACACGTACAGATCATCAAGCCGATCCTAAGTTAGTAAAATTGTTT
GAGAGAAAAAGCCTTTGGGAACAGTAA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References