Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | /Acetyltransf_4(toxin) |
Location | 1322647..1324064 | Replicon | chromosome |
Accession | NZ_AP014862 | ||
Organism | Pseudomonas furukawaii strain KF707 |
Toxin (Protein)
Gene name | - | Uniprot ID | L8MIQ2 |
Locus tag | KF707C_RS06145 | Protein ID | WP_003451691.1 |
Coordinates | 1322647..1323216 (+) | Length | 190 a.a. |
Antitoxin (Protein)
Gene name | - | Uniprot ID | L8MFK6 |
Locus tag | KF707C_RS06150 | Protein ID | WP_003451694.1 |
Coordinates | 1323222..1324064 (+) | Length | 281 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
KF707C_RS06140 | 1318916..1322395 | - | 3480 | WP_003451688.1 | hybrid sensor histidine kinase/response regulator | - |
KF707C_RS06145 | 1322647..1323216 | + | 570 | WP_003451691.1 | GNAT family N-acetyltransferase | Toxin |
KF707C_RS06150 | 1323222..1324064 | + | 843 | WP_003451694.1 | AraC family transcriptional regulator | Antitoxin |
KF707C_RS06155 | 1324101..1324832 | + | 732 | WP_003451697.1 | AzlC family ABC transporter permease | - |
KF707C_RS06160 | 1324814..1325143 | + | 330 | WP_003451701.1 | AzlD domain-containing protein | - |
KF707C_RS06165 | 1325241..1327115 | + | 1875 | WP_003451704.1 | MFS transporter | - |
KF707C_RS06170 | 1327167..1327481 | - | 315 | WP_003451706.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
KF707C_RS06175 | 1327631..1328572 | - | 942 | WP_003451708.1 | bile acid:sodium symporter family protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 190 a.a. Molecular weight: 21077.14 Da Isoelectric Point: 7.3196
>T30983 WP_003451691.1 NZ_AP014862:1322647-1323216 [Pseudomonas furukawaii]
MFNPQPVALQRGALRLDPLAEADIPALVTLAEANREALVYMSGPLRPDWYRQGLAAQREGDALVFAIRLGDNLVGTTRFA
DFMPSLPAAEIGWTWLAGSEHGSGLNASIKYLMLRHAFEDWQLVRVQLKTAASNLRAQRAIEKLGALREGVLRNHRRLAD
GRLDDSVLYSITDKDWPEVKQRLEALFSA
MFNPQPVALQRGALRLDPLAEADIPALVTLAEANREALVYMSGPLRPDWYRQGLAAQREGDALVFAIRLGDNLVGTTRFA
DFMPSLPAAEIGWTWLAGSEHGSGLNASIKYLMLRHAFEDWQLVRVQLKTAASNLRAQRAIEKLGALREGVLRNHRRLAD
GRLDDSVLYSITDKDWPEVKQRLEALFSA
Download Length: 570 bp
>T30983 NZ_AP014862:1322647-1323216 [Pseudomonas furukawaii]
ATGTTCAATCCACAACCGGTCGCACTGCAGCGAGGCGCCTTGCGCCTGGACCCGCTGGCAGAGGCCGACATCCCGGCCCT
GGTGACCCTGGCCGAAGCCAACCGCGAGGCCCTGGTCTACATGAGCGGCCCCTTGCGTCCCGACTGGTATCGCCAGGGCC
TGGCCGCCCAGCGGGAGGGCGACGCCCTGGTCTTCGCCATTCGCCTGGGCGACAACCTGGTGGGCACCACGCGCTTCGCC
GACTTCATGCCCAGCCTGCCGGCCGCCGAGATCGGCTGGACCTGGCTGGCCGGCAGCGAACACGGCAGTGGCCTCAACGC
CTCGATCAAGTACCTGATGTTGCGCCATGCCTTCGAGGACTGGCAGCTGGTGCGGGTGCAACTGAAGACGGCCGCCAGCA
ACCTGCGTGCCCAGCGCGCCATCGAGAAACTCGGTGCCCTGCGCGAAGGCGTGTTGCGCAACCATCGACGGCTGGCCGAC
GGCCGCCTGGATGACAGCGTGTTGTACAGCATCACCGACAAGGACTGGCCGGAGGTGAAGCAACGCCTGGAGGCGCTGTT
CAGCGCCTGA
ATGTTCAATCCACAACCGGTCGCACTGCAGCGAGGCGCCTTGCGCCTGGACCCGCTGGCAGAGGCCGACATCCCGGCCCT
GGTGACCCTGGCCGAAGCCAACCGCGAGGCCCTGGTCTACATGAGCGGCCCCTTGCGTCCCGACTGGTATCGCCAGGGCC
TGGCCGCCCAGCGGGAGGGCGACGCCCTGGTCTTCGCCATTCGCCTGGGCGACAACCTGGTGGGCACCACGCGCTTCGCC
GACTTCATGCCCAGCCTGCCGGCCGCCGAGATCGGCTGGACCTGGCTGGCCGGCAGCGAACACGGCAGTGGCCTCAACGC
CTCGATCAAGTACCTGATGTTGCGCCATGCCTTCGAGGACTGGCAGCTGGTGCGGGTGCAACTGAAGACGGCCGCCAGCA
ACCTGCGTGCCCAGCGCGCCATCGAGAAACTCGGTGCCCTGCGCGAAGGCGTGTTGCGCAACCATCGACGGCTGGCCGAC
GGCCGCCTGGATGACAGCGTGTTGTACAGCATCACCGACAAGGACTGGCCGGAGGTGAAGCAACGCCTGGAGGCGCTGTT
CAGCGCCTGA
Antitoxin
Download Length: 281 a.a. Molecular weight: 31159.35 Da Isoelectric Point: 7.6335
>AT30983 WP_003451694.1 NZ_AP014862:1323222-1324064 [Pseudomonas furukawaii]
MGEPRENVHFWQAGHLGGLELLSARYIDHRFAPHAHDGYAIAVIESGAERYRYRGVEHLAPAGSLALINPDEVHTGSKGD
DDGWRYRVFYPEAEQVRAVLDELELPIAGLPALRGSVHRDADLVDGFLCLHRLLESPSSALEQQTAWRDALLALFRRHAR
LPDPAMPGREPLAVLRAKDLLRERLAEPPSLEALAAEVNLSPFHFARTFRRATGLPPHAWLKQQRLDQARALLKAGCAPV
NVAAQLGFADQSHLTRQFKQAYGVGPGEYRNACARSFKTH
MGEPRENVHFWQAGHLGGLELLSARYIDHRFAPHAHDGYAIAVIESGAERYRYRGVEHLAPAGSLALINPDEVHTGSKGD
DDGWRYRVFYPEAEQVRAVLDELELPIAGLPALRGSVHRDADLVDGFLCLHRLLESPSSALEQQTAWRDALLALFRRHAR
LPDPAMPGREPLAVLRAKDLLRERLAEPPSLEALAAEVNLSPFHFARTFRRATGLPPHAWLKQQRLDQARALLKAGCAPV
NVAAQLGFADQSHLTRQFKQAYGVGPGEYRNACARSFKTH
Download Length: 843 bp
>AT30983 NZ_AP014862:1323222-1324064 [Pseudomonas furukawaii]
ATGGGCGAGCCGCGGGAGAACGTGCATTTCTGGCAGGCCGGCCATCTGGGTGGGCTGGAACTGCTGTCCGCGCGCTACAT
CGATCACCGCTTCGCGCCCCACGCTCACGATGGCTACGCGATCGCTGTGATCGAGAGTGGGGCGGAGCGCTATCGCTACC
GGGGTGTCGAGCACCTGGCGCCCGCCGGCAGCCTGGCGCTGATCAACCCGGATGAGGTGCATACCGGCTCCAAGGGTGAT
GACGACGGCTGGCGCTACCGGGTGTTCTATCCCGAAGCGGAGCAGGTCCGTGCCGTGCTCGACGAGCTGGAGCTGCCGAT
TGCCGGTCTGCCGGCGCTGCGGGGCAGCGTGCACCGCGACGCCGACCTGGTGGACGGTTTCCTGTGCCTGCATCGCCTGC
TGGAATCCCCGTCCAGCGCGCTGGAGCAGCAGACCGCCTGGCGCGATGCCTTGCTGGCGCTGTTCCGCCGTCACGCCCGG
CTGCCTGATCCGGCCATGCCCGGACGGGAGCCCCTGGCCGTGCTGCGGGCCAAGGATCTGTTGCGGGAGCGCCTGGCGGA
GCCGCCTTCCCTGGAGGCGCTGGCGGCCGAGGTGAACCTGTCGCCGTTTCATTTCGCCCGTACCTTCCGCCGTGCCACGG
GCCTGCCACCCCATGCCTGGCTCAAGCAGCAGCGCCTGGACCAGGCCCGGGCCCTGCTCAAGGCCGGGTGCGCGCCGGTG
AACGTGGCGGCGCAGTTGGGTTTCGCAGACCAGAGCCACCTGACCCGCCAGTTCAAGCAGGCCTATGGCGTCGGGCCGGG
CGAATACCGCAACGCCTGCGCAAGATCGTTCAAGACCCACTGA
ATGGGCGAGCCGCGGGAGAACGTGCATTTCTGGCAGGCCGGCCATCTGGGTGGGCTGGAACTGCTGTCCGCGCGCTACAT
CGATCACCGCTTCGCGCCCCACGCTCACGATGGCTACGCGATCGCTGTGATCGAGAGTGGGGCGGAGCGCTATCGCTACC
GGGGTGTCGAGCACCTGGCGCCCGCCGGCAGCCTGGCGCTGATCAACCCGGATGAGGTGCATACCGGCTCCAAGGGTGAT
GACGACGGCTGGCGCTACCGGGTGTTCTATCCCGAAGCGGAGCAGGTCCGTGCCGTGCTCGACGAGCTGGAGCTGCCGAT
TGCCGGTCTGCCGGCGCTGCGGGGCAGCGTGCACCGCGACGCCGACCTGGTGGACGGTTTCCTGTGCCTGCATCGCCTGC
TGGAATCCCCGTCCAGCGCGCTGGAGCAGCAGACCGCCTGGCGCGATGCCTTGCTGGCGCTGTTCCGCCGTCACGCCCGG
CTGCCTGATCCGGCCATGCCCGGACGGGAGCCCCTGGCCGTGCTGCGGGCCAAGGATCTGTTGCGGGAGCGCCTGGCGGA
GCCGCCTTCCCTGGAGGCGCTGGCGGCCGAGGTGAACCTGTCGCCGTTTCATTTCGCCCGTACCTTCCGCCGTGCCACGG
GCCTGCCACCCCATGCCTGGCTCAAGCAGCAGCGCCTGGACCAGGCCCGGGCCCTGCTCAAGGCCGGGTGCGCGCCGGTG
AACGTGGCGGCGCAGTTGGGTTTCGCAGACCAGAGCCACCTGACCCGCCAGTTCAAGCAGGCCTATGGCGTCGGGCCGGG
CGAATACCGCAACGCCTGCGCAAGATCGTTCAAGACCCACTGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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