30886

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) ParST/RES-Xre
Location 1976797..1977794 Replicon chromosome
Accession NZ_AP014809
Organism Methylorubrum populi strain P-1M

Toxin (Protein)


Gene name ParT Uniprot ID -
Locus tag MPPM_RS09080 Protein ID WP_096484777.1
Coordinates 1976797..1977294 (-) Length 166 a.a.

Antitoxin (Protein)


Gene name ParS Uniprot ID -
Locus tag MPPM_RS09085 Protein ID WP_096484778.1
Coordinates 1977291..1977794 (-) Length 168 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MPPM_RS09060 1972973..1973524 + 552 WP_096484773.1 alpha/beta hydrolase -
MPPM_RS09065 1973724..1974110 + 387 WP_096484774.1 exopolysaccharide production protein YjbE -
MPPM_RS09070 1974219..1975247 - 1029 WP_096484775.1 TIGR01620 family protein -
MPPM_RS09075 1975244..1976692 - 1449 WP_096484776.1 YcjX family protein -
MPPM_RS09080 1976797..1977294 - 498 WP_096484777.1 RES family NAD+ phosphorylase Toxin
MPPM_RS09085 1977291..1977794 - 504 WP_096484778.1 MbcA/ParS/Xre antitoxin family protein Antitoxin
MPPM_RS09090 1977856..1981224 - 3369 WP_096484779.1 PAS domain-containing protein -
MPPM_RS09095 1981221..1982606 - 1386 WP_096484780.1 O-antigen ligase family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RES domain

(5-151)

Antitoxin

Antitoxin Xre-like, helix-turn-helix domain

(39-100)


Sequences

Toxin        


Download         Length: 166 a.a.        Molecular weight: 17764.14 Da        Isoelectric Point: 6.2285

>T30886 WP_096484777.1 NZ_AP014809:c1977294-1976797 [Methylorubrum populi]
VSQSLWRIGTDARTYTADDLSGTGAKLSGGRWNAVGVAVVYAAGNRALACLETFVHLNAGGLPLNRYLVEIAVPDDVWAA
AEVATPDRLPVGWDAEPAGLVSLTFGTDWANGNRSALLLVPSVIVPEEHNALINPTHPDAARIAARKVRKWLYDPRLDRD
RLPFA

Download         Length: 498 bp

>T30886 NZ_AP014809:c1977294-1976797 [Methylorubrum populi]
GTGAGCCAATCCCTCTGGCGGATCGGCACCGATGCCAGGACCTACACCGCTGACGACCTGTCGGGGACTGGGGCCAAGCT
CTCCGGTGGCCGGTGGAATGCCGTCGGGGTCGCCGTGGTCTACGCGGCGGGCAACCGCGCCCTCGCCTGCCTCGAAACCT
TCGTCCACCTCAATGCCGGCGGCCTGCCATTGAATCGATATCTCGTCGAGATCGCGGTGCCGGATGACGTCTGGGCGGCG
GCCGAGGTCGCGACGCCGGACAGGCTGCCCGTGGGATGGGATGCCGAGCCGGCGGGCCTCGTTAGCCTGACCTTCGGCAC
GGACTGGGCGAACGGCAACCGGTCGGCTCTCCTGCTGGTCCCCTCCGTCATCGTGCCGGAGGAGCACAACGCCCTCATCA
ATCCCACTCATCCCGATGCTGCCAGGATCGCGGCCCGAAAGGTCCGCAAGTGGTTGTACGACCCGCGCCTCGACCGCGAC
CGGCTTCCATTCGCGTGA

Antitoxin


Download         Length: 168 a.a.        Molecular weight: 18197.98 Da        Isoelectric Point: 9.7939

>AT30886 WP_096484778.1 NZ_AP014809:c1977794-1977291 [Methylorubrum populi]
MSDTRADLPFKRRKPQAVGLRSASRPFAYLDLYRASPFDRIEVIKAGVPAKSVKGFITALRLDQQVMFDALNLKTATVNK
KAARNEVLSAEDSERVVGLAKLVGQLEAMIEEAGEGKDFDAPAWLSRWLREPLPALGGGKPLDLLDTMEGQALVSRALAQ
IQSGAYA

Download         Length: 504 bp

>AT30886 NZ_AP014809:c1977794-1977291 [Methylorubrum populi]
ATGTCGGATACGAGAGCAGATCTCCCGTTCAAGCGCAGGAAGCCGCAGGCCGTTGGCCTCCGTTCTGCTTCCCGTCCCTT
TGCCTATCTCGACCTCTACCGCGCCTCGCCCTTCGACCGCATCGAGGTCATCAAGGCCGGCGTTCCGGCCAAGTCGGTCA
AGGGCTTCATCACCGCGCTGCGCCTCGACCAGCAGGTGATGTTCGATGCCCTCAATCTGAAAACGGCCACGGTCAATAAG
AAGGCGGCACGGAACGAGGTCCTCTCGGCCGAGGACAGTGAGCGGGTCGTCGGGCTGGCGAAGCTCGTCGGACAGCTCGA
AGCGATGATCGAGGAAGCCGGAGAGGGAAAGGATTTCGATGCGCCGGCATGGCTGTCGCGCTGGCTGCGCGAGCCCCTGC
CGGCCCTGGGCGGCGGCAAACCGCTCGACCTCCTCGACACAATGGAAGGACAGGCTCTGGTTTCGCGCGCGCTGGCGCAG
ATCCAGAGCGGAGCCTATGCGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References