Detailed information of TA system
Overview
TA module
Type | II | Classification (family/domain) | mazEF/MazF(toxin) |
Location | 523267..523904 | Replicon | |
Accession | NC_022075 | ||
Organism | Bacillus amyloliquefaciens subsp. plantarum UCMB5033 |
Toxin (Protein)
Gene name | mazF | Uniprot ID | G4NU33 |
Locus tag | RBAU_RS02480 | Protein ID | WP_003156187.1 |
Coordinates | 523554..523904 (+) | Length | 117 a.a. |
Antitoxin (Protein)
Gene name | mazE | Uniprot ID | I2HMS5 |
Locus tag | RBAU_RS02475 | Protein ID | WP_003156188.1 |
Coordinates | 523267..523548 (+) | Length | 94 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
RBAU_RS02455 | 519632..520231 | - | 600 | WP_020953896.1 | rhomboid family intramembrane serine protease | - |
RBAU_RS02460 | 520324..520689 | + | 366 | WP_007410229.1 | holo-ACP synthase | - |
RBAU_RS02465 | 520854..521861 | + | 1008 | WP_007410230.1 | outer membrane lipoprotein carrier protein LolA | - |
RBAU_RS02470 | 521978..523147 | + | 1170 | WP_007410231.1 | alanine racemase | - |
RBAU_RS02475 | 523267..523548 | + | 282 | WP_003156188.1 | type II toxin-antitoxin system antitoxin EndoAI | Antitoxin |
RBAU_RS02480 | 523554..523904 | + | 351 | WP_003156187.1 | type II toxin-antitoxin system endoribonuclease NdoA | Toxin |
RBAU_RS02485 | 524025..524846 | + | 822 | WP_007410232.1 | STAS domain-containing protein | - |
RBAU_RS02490 | 524851..525216 | + | 366 | WP_003156180.1 | RsbT antagonist protein RsbS | - |
RBAU_RS02495 | 525219..525620 | + | 402 | WP_003156178.1 | anti-sigma regulatory factor | - |
RBAU_RS02500 | 525632..526639 | + | 1008 | WP_007410233.1 | PP2C family protein-serine/threonine phosphatase | - |
RBAU_RS02505 | 526703..527032 | + | 330 | WP_003156176.1 | anti-sigma factor antagonist RsbV | - |
RBAU_RS02510 | 527029..527511 | + | 483 | WP_003156173.1 | anti-sigma B factor RsbW | - |
RBAU_RS02515 | 527477..528265 | + | 789 | WP_003156171.1 | RNA polymerase sigma factor SigB | - |
RBAU_RS02520 | 528265..528867 | + | 603 | WP_007410234.1 | SpoIIE family protein phosphatase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 117 a.a. Molecular weight: 12977.98 Da Isoelectric Point: 4.8781
>T29910 WP_003156187.1 NC_022075:523554-523904 [Bacillus velezensis UCMB5033]
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQI
RTIDKQRLTDKITHLDDEMMDKVDEALQISLALIDF
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQI
RTIDKQRLTDKITHLDDEMMDKVDEALQISLALIDF
Download Length: 351 bp
>T29910 NC_022075:523554-523904 [Bacillus velezensis UCMB5033]
TTGATTGTAAAGCGCGGCGATGTTTATTTTGCTGATTTATCTCCTGTTGTTGGCTCAGAGCAAGGCGGCGTACGCCCGGT
TTTAGTGATCCAAAATGATATCGGAAATCGCTTTAGCCCGACTGCTATTGTTGCAGCCATAACAGCCCAAATACAGAAAG
CGAAATTACCAACCCACGTCGAAATTGATGCAAAACGCTACGGTTTTGAAAGAGATTCCGTTATTTTGCTGGAGCAAATT
CGGACGATTGACAAGCAAAGATTAACGGATAAAATAACTCATCTGGATGATGAAATGATGGATAAGGTTGATGAAGCCCT
GCAAATCAGTTTGGCACTCATTGATTTTTAG
TTGATTGTAAAGCGCGGCGATGTTTATTTTGCTGATTTATCTCCTGTTGTTGGCTCAGAGCAAGGCGGCGTACGCCCGGT
TTTAGTGATCCAAAATGATATCGGAAATCGCTTTAGCCCGACTGCTATTGTTGCAGCCATAACAGCCCAAATACAGAAAG
CGAAATTACCAACCCACGTCGAAATTGATGCAAAACGCTACGGTTTTGAAAGAGATTCCGTTATTTTGCTGGAGCAAATT
CGGACGATTGACAAGCAAAGATTAACGGATAAAATAACTCATCTGGATGATGAAATGATGGATAAGGTTGATGAAGCCCT
GCAAATCAGTTTGGCACTCATTGATTTTTAG
Antitoxin
Download Length: 94 a.a. Molecular weight: 10562.92 Da Isoelectric Point: 6.4706
>AT29910 WP_003156188.1 NC_022075:523267-523548 [Bacillus velezensis UCMB5033]
MSESSARTEMKISLPENLVAELDGVAMREKRSRNELISQAVRAYVSERTTRHNRDLMRRGYMEMAKINLNISSEAHYAEC
EAETTVERLVSGG
MSESSARTEMKISLPENLVAELDGVAMREKRSRNELISQAVRAYVSERTTRHNRDLMRRGYMEMAKINLNISSEAHYAEC
EAETTVERLVSGG
Download Length: 282 bp
>AT29910 NC_022075:523267-523548 [Bacillus velezensis UCMB5033]
TTGTCTGAATCCAGCGCAAGAACCGAAATGAAAATCAGCTTGCCTGAAAACTTAGTAGCTGAATTGGATGGTGTAGCGAT
GCGGGAGAAACGAAGCAGAAACGAACTGATATCACAAGCAGTGAGAGCGTATGTCAGCGAACGGACAACTCGCCATAACC
GTGATTTGATGAGACGCGGGTATATGGAAATGGCGAAAATCAACTTGAATATCTCTTCTGAGGCTCACTATGCTGAGTGC
GAAGCAGAAACGACCGTTGAGCGCTTAGTCAGCGGAGGATAA
TTGTCTGAATCCAGCGCAAGAACCGAAATGAAAATCAGCTTGCCTGAAAACTTAGTAGCTGAATTGGATGGTGTAGCGAT
GCGGGAGAAACGAAGCAGAAACGAACTGATATCACAAGCAGTGAGAGCGTATGTCAGCGAACGGACAACTCGCCATAACC
GTGATTTGATGAGACGCGGGTATATGGAAATGGCGAAAATCAACTTGAATATCTCTTCTGAGGCTCACTATGCTGAGTGC
GAAGCAGAAACGACCGTTGAGCGCTTAGTCAGCGGAGGATAA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|