Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-RelB
Location 91773..92155 Replicon plasmid Apa386Bp1
Accession NC_021976
Organism Acetobacter pasteurianus 386B

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag APA386B_RS15110 Protein ID WP_081939029.1
Coordinates 92000..92155 (+) Length 52 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag APA386B_RS13475 Protein ID WP_040133421.1
Coordinates 91773..92015 (+) Length 81 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
APA386B_RS13450 88227..89150 + 924 WP_020936725.1 TniB family NTP-binding protein -
APA386B_RS13455 89143..90144 + 1002 WP_020936726.1 TniQ family protein -
APA386B_RS13460 90458..90742 + 285 WP_035362983.1 hypothetical protein -
APA386B_RS13465 90730..91110 + 381 WP_003627483.1 hypothetical protein -
APA386B_RS13470 91136..91642 + 507 WP_003627485.1 hypothetical protein -
APA386B_RS13475 91773..92015 + 243 WP_040133421.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
APA386B_RS15110 92000..92155 + 156 WP_081939029.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
APA386B_RS13480 92158..93288 + 1131 WP_020936729.1 hypothetical protein -
APA386B_RS15315 93300..93818 + 519 WP_020936730.1 hypothetical protein -
APA386B_RS14865 93793..94216 + 424 Protein_101 hypothetical protein -
APA386B_RS13495 94229..95275 - 1047 WP_020936732.1 Fic family protein -
APA386B_RS13500 95272..95565 - 294 WP_003626805.1 hypothetical protein -
APA386B_RS13505 95719..97038 - 1320 WP_003626803.1 replication protein C -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..194780 194780


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin HigB-like

(13-90)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 52 a.a.        Molecular weight: 6683.07 Da        Isoelectric Point: 12.5075

>T29892 WP_081939029.1 NC_021976:92000-92155 [Acetobacter pasteurianus 386B]
KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK

Download         Length: 156 bp

>T29892 NC_021976:92000-92155 [Acetobacter pasteurianus 386B]
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Antitoxin


Download         Length: 81 a.a.        Molecular weight: 10400.12 Da        Isoelectric Point: 12.7030

>AT29892 WP_040133421.1 NC_021976:91773-92015 [Acetobacter pasteurianus 386B]
KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
K

Download         Length: 243 bp

>AT29892 NC_021976:91773-92015 [Acetobacter pasteurianus 386B]
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References