Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type VII Classification (family/domain) HepT-MntA/HepT(toxin)
Location 1649038..1649869 Replicon chromosome
Accession NZ_OX461117
Organism Shewanella baltica strain SF1039 isolate SF1039

Toxin (Protein)


Gene name hepT Uniprot ID -
Locus tag QOT06_RS07175 Protein ID WP_088585313.1
Coordinates 1649038..1649454 (-) Length 139 a.a.

Antitoxin (Protein)


Gene name mntA Uniprot ID -
Locus tag QOT06_RS07180 Protein ID WP_088585314.1
Coordinates 1649447..1649869 (-) Length 141 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QOT06_RS07165 1645249..1647189 + 1941 WP_107948338.1 nucleoside-diphosphate sugar epimerase/dehydratase -
QOT06_RS07170 1647264..1648616 + 1353 WP_283628149.1 phosphoglucosamine mutase -
QOT06_RS07175 1649038..1649454 - 417 WP_088585313.1 DUF86 domain-containing protein Toxin
QOT06_RS07180 1649447..1649869 - 423 WP_088585314.1 nucleotidyltransferase domain-containing protein Antitoxin
QOT06_RS07185 1650241..1650501 + 261 WP_115017884.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
QOT06_RS07190 1650503..1650850 + 348 WP_283628150.1 type II toxin-antitoxin system RelE/ParE family toxin -
QOT06_RS07195 1651062..1652270 + 1209 WP_283628151.1 J domain-containing protein -
QOT06_RS07200 1653042..1653194 - 153 WP_248943579.1 hypothetical protein -
QOT06_RS07205 1653185..1653499 - 315 WP_014610940.1 hypothetical protein -
QOT06_RS07210 1653611..1653790 + 180 Protein_1402 transposase -
QOT06_RS07215 1654163..1654369 - 207 Protein_1403 integrase -
QOT06_RS07220 1654526..1654768 + 243 WP_014610908.1 type II toxin-antitoxin system ParD family antitoxin -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Ribonuclease HepT-like

(12-130)

Antitoxin

Polymerase beta, nucleotidyltransferase

(9-96)


Sequences

Toxin        


Download         Length: 139 a.a.        Molecular weight: 16056.55 Da        Isoelectric Point: 7.3244

>T297070 WP_088585313.1 NZ_OX461117:c1649454-1649038 [Shewanella baltica]
MNDIIINKIATIKRCIKRIQQVYGDGSMFKQDFTLQDSVILNLQRCCEASIDIANHINRQQQLGIPQSSRDSFTLLSQNK
IINQQLADNLKKMVGLRNIAVHDYQELNLDIVVHVVQHHLEDFEQFIEVIKFCPRMSY

Download         Length: 417 bp

Antitoxin


Download         Length: 141 a.a.        Molecular weight: 15861.89 Da        Isoelectric Point: 5.1231

>AT297070 WP_088585314.1 NZ_OX461117:c1649869-1649447 [Shewanella baltica]
MQQLNESIIINLLQDNIPQLRLIYLFGSYAQGTQHRNSDIDIAVLADVTLDNIARWQLAQKLASALDTDVDLVDLRTAST
VLCQQVVTQGKRLWGTRQDDEIFAVKTISMYQHLQAERQAIIDDATAKTTANDHRGRHFE

Download         Length: 423 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References