Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YafQ-DinJ
Location 976656..977216 Replicon chromosome
Accession NZ_OX458329
Organism Mobiluncus sp. Marseille-Q7826

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag QNH67_RS04180 Protein ID WP_282921656.1
Coordinates 976944..977216 (+) Length 91 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag QNH67_RS04175 Protein ID WP_282921655.1
Coordinates 976656..976940 (+) Length 95 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QNH67_RS04170 973488..976172 - 2685 WP_282921654.1 aconitate hydratase AcnA -
QNH67_RS04175 976656..976940 + 285 WP_282921655.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
QNH67_RS04180 976944..977216 + 273 WP_282921656.1 type II toxin-antitoxin system YafQ family toxin Toxin
QNH67_RS04185 977352..978242 - 891 WP_282921657.1 hypothetical protein -
QNH67_RS04190 978493..979062 - 570 WP_282921658.1 GNAT family N-acetyltransferase -
QNH67_RS04195 979067..980311 - 1245 WP_282921659.1 TRAM domain-containing protein -
QNH67_RS04200 980322..982157 - 1836 WP_282921660.1 amino acid transporter -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, YafQ-like toxin

(1-90)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(5-71)


Sequences

Toxin        


Download         Length: 91 a.a.        Molecular weight: 10443.13 Da        Isoelectric Point: 8.9977

>T296975 WP_282921656.1 NZ_OX458329:976944-977216 [Mobiluncus sp. Marseille-Q7826]
MLELKTTAQFRKDYKRIKKRGYNLSLLQDVLETLCAEKPLDANYKDHALLGAYKGFRECHIQPDWLLIYTTDKDKLILVA
ARTGSHADLF

Download         Length: 273 bp

Antitoxin


Download         Length: 95 a.a.        Molecular weight: 10344.65 Da        Isoelectric Point: 4.7815

>AT296975 WP_282921655.1 NZ_OX458329:976656-976940 [Mobiluncus sp. Marseille-Q7826]
MAKTANISLRIEPEIKHEADKLFSSFGISVTDAINIFLRTSIMEGGFPFAIKQPRYNAETEAAITEARDIISGKVQTNSY
NSATELFKSLDTDG

Download         Length: 285 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References