Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YafQ-DinJ
Location 166203..166753 Replicon chromosome
Accession NZ_OX458329
Organism Mobiluncus sp. Marseille-Q7826

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag QNH67_RS00650 Protein ID WP_282921010.1
Coordinates 166203..166484 (-) Length 94 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag QNH67_RS00655 Protein ID WP_282921011.1
Coordinates 166481..166753 (-) Length 91 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QNH67_RS00640 161415..164477 + 3063 WP_282921008.1 glycoside hydrolase family 2 TIM barrel-domain containing protein -
QNH67_RS00645 164490..166013 + 1524 WP_282921009.1 MFS transporter -
QNH67_RS00650 166203..166484 - 282 WP_282921010.1 type II toxin-antitoxin system YafQ family toxin Toxin
QNH67_RS00655 166481..166753 - 273 WP_282921011.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
QNH67_RS00660 166894..167586 - 693 WP_282921012.1 class I SAM-dependent methyltransferase -
QNH67_RS00665 168209..168757 + 549 WP_282921013.1 YbhB/YbcL family Raf kinase inhibitor-like protein -
QNH67_RS00670 169256..170560 - 1305 WP_282921014.1 chorismate-binding protein -
QNH67_RS00675 170904..171263 + 360 WP_282921015.1 NADH-quinone oxidoreductase subunit A -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(4-91)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(1-87)


Sequences

Toxin        


Download         Length: 94 a.a.        Molecular weight: 10979.81 Da        Isoelectric Point: 9.7706

>T296973 WP_282921010.1 NZ_OX458329:c166484-166203 [Mobiluncus sp. Marseille-Q7826]
MKYEVRFTSQFKKDVKLAKKQHRDLEKLFKVIQILAEGGSLPERYRDHGLSGTFAGTRECHIEPDWLLIYEIRSNVLVLM
LYRLGTHAELFQK

Download         Length: 282 bp

Antitoxin


Download         Length: 91 a.a.        Molecular weight: 10008.42 Da        Isoelectric Point: 5.1088

>AT296973 WP_282921011.1 NZ_OX458329:c166753-166481 [Mobiluncus sp. Marseille-Q7826]
MTTTNLNIRTDKEVKEQADRIFSELGLNMTTAINMFLRTAIREQGIPFKLSLNVPNDATAAAIREGRRIADDPNVKGYST
LDELKAALEV

Download         Length: 273 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References