Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 571179..571815 Replicon chromosome
Accession NZ_OX419573
Organism Bacillus subtilis isolate NRS6085

Toxin (Protein)


Gene name mazF Uniprot ID G4NU33
Locus tag KJP57_RS03035 Protein ID WP_003156187.1
Coordinates 571465..571815 (+) Length 117 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID G4NU32
Locus tag KJP57_RS03030 Protein ID WP_003225183.1
Coordinates 571179..571460 (+) Length 94 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KJP57_RS03010 (567538) 567538..568137 - 600 WP_029317326.1 rhomboid family intramembrane serine protease -
KJP57_RS03015 (568232) 568232..568597 + 366 WP_015252768.1 holo-ACP synthase -
KJP57_RS03020 (568763) 568763..569779 + 1017 WP_003234282.1 outer membrane lipoprotein carrier protein LolA -
KJP57_RS03025 (569894) 569894..571063 + 1170 WP_017697002.1 alanine racemase -
KJP57_RS03030 (571179) 571179..571460 + 282 WP_003225183.1 type II toxin-antitoxin system antitoxin EndoAI Antitoxin
KJP57_RS03035 (571465) 571465..571815 + 351 WP_003156187.1 type II toxin-antitoxin system endoribonuclease NdoA Toxin
KJP57_RS03040 (571930) 571930..572754 + 825 WP_009966610.1 RsbT co-antagonist protein RsbRA -
KJP57_RS03045 (572759) 572759..573124 + 366 WP_003225190.1 RsbT antagonist protein RsbS -
KJP57_RS03050 (573128) 573128..573529 + 402 WP_003246640.1 serine/threonine-protein kinase RsbT -
KJP57_RS03055 (573541) 573541..574548 + 1008 WP_003234295.1 phosphoserine phosphatase RsbU -
KJP57_RS03060 (574610) 574610..574939 + 330 WP_003234298.1 anti-sigma factor antagonist RsbV -
KJP57_RS03065 (574936) 574936..575418 + 483 WP_003234299.1 anti-sigma B factor RsbW -
KJP57_RS03070 (575384) 575384..576172 + 789 WP_003246715.1 RNA polymerase sigma factor SigB -
KJP57_RS03075 (576172) 576172..576771 + 600 WP_003246608.1 phosphoserine phosphatase RsbX -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(4-111)

Antitoxin

Ribbon-helix-helix protein, CopG

(12-45)


Sequences

Toxin        


Download         Length: 117 a.a.        Molecular weight: 12977.98 Da        Isoelectric Point: 4.8781

>T296873 WP_003156187.1 NZ_OX419573:571465-571815 [Bacillus subtilis]
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQI
RTIDKQRLTDKITHLDDEMMDKVDEALQISLALIDF

Download         Length: 351 bp

Antitoxin


Download         Length: 94 a.a.        Molecular weight: 10546.92 Da        Isoelectric Point: 6.4708

>AT296873 WP_003225183.1 NZ_OX419573:571179-571460 [Bacillus subtilis]
MSESSARTEMKISLPENLVAELDGVAMREKRSRNELISQAVRAYVSERTTRHNRDLMRRGYMEMAKINLNISSEAHFAEC
EAETTVERLVSGG

Download         Length: 282 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 4MDX
PDB 4ME7
PDB 1NE8

Antitoxin

Source ID Structure
PDB 4ME7
AlphaFold DB G4NU32

References