Detailed information of TA system TA029683

Bioinformatically predicted

Overview

TA module

• Type: IV
• Classification (family/domain): cptAB/-
• Location: 3550725..3551366
• Replicon: chromosome
• Accession: NC_021733
• Organism: Acinetobacter baumannii BJAB0715

Toxin (Protein)

• Gene name: cptA
• Uniprot ID: A0A5N0FZY3
• Locus tag: BJAB0715_RS17020
• Protein ID: WP_000607074.1
• Coordinates: 3550725..3551114 (-)
• Length: 130 a.a.

Antitoxin (Protein)

• Gene name: cptB
• Uniprot ID: -
• Locus tag: BJAB0715_RS17025
• Protein ID: WP_011860336.1
• Coordinates: 3551121..3551366 (-)
• Length: 82 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
BJAB0715_RS17005	3545843..3548038	-	2196	WP_001158905.1	TRAP transporter large permease subunit	-
BJAB0715_RS17010	3548226..3548792	-	567	WP_020753478.1	rhombosortase	-
BJAB0715_RS17015	3548870..3549955	-	1086	WP_000049106.1	hypothetical protein	-
BJAB0715_RS17020	3550725..3551114	-	390	WP_000607074.1	membrane protein	Toxin
BJAB0715_RS17025	3551121..3551366	-	246	WP_011860336.1	succinate dehydrogenase assembly factor 2	Antitoxin
BJAB0715_RS17030	3551566..3552738	+	1173	WP_001190545.1	acyl-CoA dehydrogenase family protein	-
BJAB0715_RS17035	3552788..3554278	-	1491	WP_000415136.1	NAD(P)/FAD-dependent oxidoreductase	-
BJAB0715_RS17040	3554460..3554837	-	378	WP_001216380.1	50S ribosomal protein L17	-
BJAB0715_RS17045	3554856..3555863	-	1008	WP_000198631.1	DNA-directed RNA polymerase subunit alpha	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Antitoxin

• Flavinator of succinate dehydrogenase (6-78)

Sequences

Toxin

Protein

• Length: 130 a.a.
• Molecular weight: 15621.89 Da
• Isoelectric Point: 10.3890

>T29683 WP_000607074.1 NC_021733:c3551114-3550725 [Acinetobacter baumannii BJAB0715]
MINHLNFKLKYSRFSIIFQFFIGLSLAVLFYQLMPLLWWLVVISLLFISFIFFLKRPQLAQIAYLDKKLWSLAYHSQNTI
SRVKILKVIDYQIFIVIYFEGHKTLTSIIWFDQMSLAEWKKLKTLEKLY

Nucleotide

• Length: 390 bp

>T29683 NC_021733:c3551114-3550725 [Acinetobacter baumannii BJAB0715]
TTGATCAACCATTTGAATTTTAAGCTGAAATATAGTCGTTTTTCGATTATATTTCAGTTTTTTATTGGCTTAAGCTTAGC
AGTTCTATTTTATCAATTAATGCCGTTACTATGGTGGTTAGTTGTAATCAGCTTACTATTTATCAGCTTTATTTTCTTTT
TAAAGCGTCCGCAGCTTGCACAAATTGCTTATTTAGATAAAAAACTATGGTCGCTTGCTTATCACTCACAGAACACCATT
TCTCGCGTCAAAATTTTAAAAGTAATTGATTATCAGATTTTCATAGTGATCTATTTTGAAGGTCATAAAACACTAACTTC
TATCATTTGGTTTGATCAAATGTCATTAGCAGAGTGGAAAAAGCTTAAAACTTTAGAAAAACTCTATTAA

Antitoxin

Protein

• Length: 82 a.a.
• Molecular weight: 9842.27 Da
• Isoelectric Point: 4.9001

>AT29683 WP_011860336.1 NC_021733:c3551366-3551121 [Acinetobacter baumannii BJAB0715]
MTLEERKVIYRARRGLKEIDVYFDPYVKNYYLKADPAEKALFAELVEQEDPDLLDWFMEVSEPPRTELRDFIYKLKHYVH
G

Nucleotide

• Length: 246 bp

>AT29683 NC_021733:c3551366-3551121 [Acinetobacter baumannii BJAB0715]
ATGACCTTGGAAGAACGTAAAGTAATCTATCGCGCACGTCGTGGTTTAAAGGAAATTGATGTCTATTTTGACCCTTATGT
GAAAAATTATTATTTAAAGGCAGACCCGGCAGAAAAAGCGTTGTTTGCTGAGTTGGTAGAACAGGAAGACCCTGATTTAC
TCGATTGGTTTATGGAAGTATCAGAACCACCACGTACCGAATTACGTGACTTTATCTATAAATTAAAACACTATGTTCAT
GGTTAA

Structures

Toxin

• AlphaFold DB: A0A5N0FZY3