Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 3483204..3483845 Replicon chromosome
Accession NC_021729
Organism Acinetobacter baumannii BJAB0868

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag BJAB0868_RS16440 Protein ID WP_000607077.1
Coordinates 3483204..3483593 (-) Length 130 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID -
Locus tag BJAB0868_RS16445 Protein ID WP_011860336.1
Coordinates 3483600..3483845 (-) Length 82 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BJAB0868_RS16425 3478322..3480517 - 2196 WP_001158906.1 TRAP transporter large permease subunit -
BJAB0868_RS16430 3480705..3481271 - 567 WP_000651538.1 rhombosortase -
BJAB0868_RS16435 3481349..3482434 - 1086 WP_000049106.1 hypothetical protein -
BJAB0868_RS16440 3483204..3483593 - 390 WP_000607077.1 membrane protein Toxin
BJAB0868_RS16445 3483600..3483845 - 246 WP_011860336.1 succinate dehydrogenase assembly factor 2 Antitoxin
BJAB0868_RS16450 3484045..3485217 + 1173 WP_001190542.1 acyl-CoA dehydrogenase family protein -
BJAB0868_RS16455 3485266..3486756 - 1491 WP_020752632.1 NAD(P)/FAD-dependent oxidoreductase -
BJAB0868_RS16460 3486938..3487315 - 378 WP_001216380.1 50S ribosomal protein L17 -
BJAB0868_RS16465 3487334..3488341 - 1008 WP_000198631.1 DNA-directed RNA polymerase subunit alpha -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(6-78)


Sequences

Toxin        


Download         Length: 130 a.a.        Molecular weight: 15552.88 Da        Isoelectric Point: 10.4313

>T29682 WP_000607077.1 NC_021729:c3483593-3483204 [Acinetobacter baumannii BJAB0868]
MINHLNFKLKYSRFSIIFQFFIGLSLAVLFYQLMPLLWWLVVISLLFISFIFFLKRPQLAQIAYLDKKLWSLAYKSQNTV
SRVKILKIIDCQIFIVIYFEGHKTLTSIIWFDQMSLAEWKKLKTLEKLY

Download         Length: 390 bp

>T29682 NC_021729:c3483593-3483204 [Acinetobacter baumannii BJAB0868]
TTGATCAACCATTTGAATTTTAAGCTGAAATATAGTCGTTTTTCGATTATATTTCAGTTTTTTATTGGCTTAAGCTTAGC
AGTTCTATTTTATCAATTAATGCCGTTACTATGGTGGTTAGTTGTAATCAGCTTACTATTTATCAGCTTTATTTTCTTTT
TAAAGCGTCCGCAGCTTGCACAAATTGCTTATTTAGATAAAAAACTATGGTCGCTTGCTTATAAGTCACAGAACACCGTT
TCTCGCGTCAAAATTTTAAAAATAATTGATTGTCAGATTTTCATAGTGATCTATTTTGAAGGTCATAAAACACTAACTTC
TATCATTTGGTTTGATCAAATGTCATTAGCAGAGTGGAAAAAGCTTAAAACTTTAGAAAAACTCTATTAA

Antitoxin


Download         Length: 82 a.a.        Molecular weight: 9842.27 Da        Isoelectric Point: 4.9001

>AT29682 WP_011860336.1 NC_021729:c3483845-3483600 [Acinetobacter baumannii BJAB0868]
MTLEERKVIYRARRGLKEIDVYFDPYVKNYYLKADPAEKALFAELVEQEDPDLLDWFMEVSEPPRTELRDFIYKLKHYVH
G

Download         Length: 246 bp

>AT29682 NC_021729:c3483845-3483600 [Acinetobacter baumannii BJAB0868]
ATGACCTTGGAAGAACGTAAAGTAATCTATCGCGCACGTCGTGGTTTAAAGGAAATTGATGTCTATTTTGACCCTTATGT
GAAAAATTATTATTTAAAGGCAGACCCGGCAGAAAAAGCGTTGTTTGCTGAGTTGGTAGAACAGGAAGACCCTGATTTAC
TAGATTGGTTTATGGAAGTATCAGAACCACCACGTACCGAATTACGTGACTTTATCTATAAATTAAAACACTATGTTCAT
GGTTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References