Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 3524472..3525113 Replicon chromosome
Accession NC_021726
Organism Acinetobacter baumannii BJAB07104

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag BJAB07104_RS16760 Protein ID WP_000607077.1
Coordinates 3524472..3524861 (-) Length 130 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID -
Locus tag BJAB07104_RS16765 Protein ID WP_011860336.1
Coordinates 3524868..3525113 (-) Length 82 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BJAB07104_RS16745 3519590..3521785 - 2196 WP_001158906.1 TRAP transporter large permease subunit -
BJAB07104_RS16750 3521973..3522539 - 567 WP_000651538.1 rhombosortase -
BJAB07104_RS16755 3522617..3523702 - 1086 WP_000049106.1 hypothetical protein -
BJAB07104_RS16760 3524472..3524861 - 390 WP_000607077.1 membrane protein Toxin
BJAB07104_RS16765 3524868..3525113 - 246 WP_011860336.1 succinate dehydrogenase assembly factor 2 Antitoxin
BJAB07104_RS16770 3525313..3526485 + 1173 WP_001190542.1 acyl-CoA dehydrogenase family protein -
BJAB07104_RS16775 3526534..3528024 - 1491 WP_000415125.1 NAD(P)/FAD-dependent oxidoreductase -
BJAB07104_RS16780 3528206..3528583 - 378 WP_001216380.1 50S ribosomal protein L17 -
BJAB07104_RS16785 3528602..3529609 - 1008 WP_000198631.1 DNA-directed RNA polymerase subunit alpha -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(6-78)


Sequences

Toxin        


Download         Length: 130 a.a.        Molecular weight: 15552.88 Da        Isoelectric Point: 10.4313

>T29681 WP_000607077.1 NC_021726:c3524861-3524472 [Acinetobacter baumannii BJAB07104]
MINHLNFKLKYSRFSIIFQFFIGLSLAVLFYQLMPLLWWLVVISLLFISFIFFLKRPQLAQIAYLDKKLWSLAYKSQNTV
SRVKILKIIDCQIFIVIYFEGHKTLTSIIWFDQMSLAEWKKLKTLEKLY

Download         Length: 390 bp

>T29681 NC_021726:c3524861-3524472 [Acinetobacter baumannii BJAB07104]
TTGATCAACCATTTGAATTTTAAGCTGAAATATAGTCGTTTTTCGATTATATTTCAGTTTTTTATTGGCTTAAGCTTAGC
AGTTCTATTTTATCAATTAATGCCGTTACTATGGTGGTTAGTTGTAATCAGCTTACTATTTATCAGCTTTATTTTCTTTT
TAAAGCGTCCGCAGCTTGCACAAATTGCTTATTTAGATAAAAAACTATGGTCGCTTGCTTATAAGTCACAGAACACCGTT
TCTCGCGTCAAAATTTTAAAAATAATTGATTGTCAGATTTTCATAGTGATCTATTTTGAAGGTCATAAAACACTAACTTC
TATCATTTGGTTTGATCAAATGTCATTAGCAGAGTGGAAAAAGCTTAAAACTTTAGAAAAACTCTATTAA

Antitoxin


Download         Length: 82 a.a.        Molecular weight: 9842.27 Da        Isoelectric Point: 4.9001

>AT29681 WP_011860336.1 NC_021726:c3525113-3524868 [Acinetobacter baumannii BJAB07104]
MTLEERKVIYRARRGLKEIDVYFDPYVKNYYLKADPAEKALFAELVEQEDPDLLDWFMEVSEPPRTELRDFIYKLKHYVH
G

Download         Length: 246 bp

>AT29681 NC_021726:c3525113-3524868 [Acinetobacter baumannii BJAB07104]
ATGACCTTGGAAGAACGTAAAGTAATCTATCGCGCACGTCGTGGTTTAAAGGAAATTGATGTCTATTTTGACCCTTATGT
GAAAAATTATTATTTAAAGGCAGACCCGGCAGAAAAAGCGTTGTTTGCTGAGTTGGTAGAACAGGAAGACCCTGATTTAC
TAGATTGGTTTATGGAAGTATCAGAACCACCACGTACCGAATTACGTGACTTTATCTATAAATTAAAACACTATGTTCAT
GGTTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References