Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/RelE(toxin) |
Location | 712724..713210 | Replicon | chromosome |
Accession | NZ_OX352944 | ||
Organism | Streptococcus suis isolate 861160_LM_H |
Toxin (Protein)
Gene name | relE | Uniprot ID | D5AGV2 |
Locus tag | QNH68_RS03465 | Protein ID | WP_011922754.1 |
Coordinates | 712941..713210 (+) | Length | 90 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | D5AGV1 |
Locus tag | QNH68_RS03460 | Protein ID | WP_002938604.1 |
Coordinates | 712724..712951 (+) | Length | 76 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
QNH68_RS03435 | 708057..708602 | - | 546 | WP_002941732.1 | NADPH-dependent FMN reductase | - |
QNH68_RS03440 | 708665..709114 | - | 450 | WP_024383028.1 | MarR family transcriptional regulator | - |
QNH68_RS03445 | 709416..709913 | + | 498 | WP_024405519.1 | DUF5590 domain-containing protein | - |
QNH68_RS03450 | 709910..711091 | + | 1182 | WP_024383693.1 | pyridoxal phosphate-dependent aminotransferase | - |
QNH68_RS03455 | 711106..712452 | + | 1347 | WP_024405517.1 | asparagine--tRNA ligase | - |
QNH68_RS03460 | 712724..712951 | + | 228 | WP_002938604.1 | DUF6290 family protein | Antitoxin |
QNH68_RS03465 | 712941..713210 | + | 270 | WP_011922754.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
QNH68_RS03470 | 713616..714940 | + | 1325 | Protein_667 | MATE family efflux transporter | - |
QNH68_RS03475 | 715124..715501 | + | 378 | WP_002937263.1 | RidA family protein | - |
QNH68_RS03480 | 715523..716410 | + | 888 | WP_074390194.1 | RNase adapter RapZ | - |
QNH68_RS03485 | 716407..717381 | + | 975 | WP_002937257.1 | YvcK family protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A126UKS2 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A140EXF0 |