Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelE(toxin)
Location 697869..698434 Replicon chromosome
Accession NZ_OX352320
Organism Rheinheimera sp. MM224

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag OM978_RS03405 Protein ID WP_264345525.1
Coordinates 697869..698153 (-) Length 95 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag OM978_RS03410 Protein ID WP_264345526.1
Coordinates 698150..698434 (-) Length 95 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OM978_RS03385 (JAMGFMIE_00681) 693833..694153 - 321 WP_264345522.1 divalent-cation tolerance protein CutA -
OM978_RS03390 (JAMGFMIE_00682) 694368..694658 + 291 WP_053423916.1 co-chaperone GroES -
OM978_RS03395 (JAMGFMIE_00683) 694710..696347 + 1638 WP_264345523.1 chaperonin GroEL -
OM978_RS03400 (JAMGFMIE_00684) 696741..697622 - 882 WP_264345524.1 restriction endonuclease -
OM978_RS03405 (JAMGFMIE_00685) 697869..698153 - 285 WP_264345525.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
OM978_RS03410 (JAMGFMIE_00686) 698150..698434 - 285 WP_264345526.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
OM978_RS03415 (JAMGFMIE_00687) 698806..700947 + 2142 WP_264346912.1 catalase/peroxidase HPI -
OM978_RS03420 (JAMGFMIE_00688) 701149..701421 + 273 WP_264345527.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
OM978_RS03425 (JAMGFMIE_00689) 701418..701711 + 294 WP_264345528.1 type II toxin-antitoxin system RelE/ParE family toxin -
OM978_RS03430 (JAMGFMIE_00690) 701883..703361 + 1479 WP_264345529.1 glycerol kinase GlpK -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Genomic island - katA 697869..708366 10497


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(2-89)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 95 a.a.        Molecular weight: 11056.82 Da        Isoelectric Point: 4.8668

>T296621 WP_264345525.1 NZ_OX352320:c698153-697869 [Rheinheimera sp. MM224]
MIYWEEEALNDREKIFEYLYAVNPLAAERTDELIEAKVENLLDHPLMGIQRASVRGRLLIIPEVSMIVSYWIDGSTIRVM
RVLHQKQQFPGLER

Download         Length: 285 bp

Antitoxin


Download         Length: 95 a.a.        Molecular weight: 10689.08 Da        Isoelectric Point: 10.0232

>AT296621 WP_264345526.1 NZ_OX352320:c698434-698150 [Rheinheimera sp. MM224]
METRIQFRVDEETKRLAQLMAESQGRTLSDACRQLTEQLAAEQRKVSAHDQWLTVQVNAAFEKLDTGNAKFVSHEQAKIS
MAERKAKIRSRANG

Download         Length: 285 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References