Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | yjhX-yjhQ/YjhX(toxin) |
Location | 4632865..4633684 | Replicon | chromosome |
Accession | NZ_OW968280 | ||
Organism | Klebsiella oxytoca isolate 101 |
Toxin (Protein)
Gene name | yjhX | Uniprot ID | J5WT09 |
Locus tag | LQ191_RS21870 | Protein ID | WP_004110819.1 |
Coordinates | 4633427..4633684 (-) | Length | 86 a.a. |
Antitoxin (Protein)
Gene name | yjhQ | Uniprot ID | - |
Locus tag | LQ191_RS21865 | Protein ID | WP_126488543.1 |
Coordinates | 4632865..4633416 (-) | Length | 184 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LQ191_RS21845 (AI2946V1_4276) | 4628715..4629992 | + | 1278 | WP_024273764.1 | hypothetical protein | - |
LQ191_RS21850 (AI2946V1_4277) | 4630010..4631173 | + | 1164 | WP_024273763.1 | MFS transporter | - |
LQ191_RS21855 | 4631219..4631983 | - | 765 | WP_224227635.1 | class I SAM-dependent methyltransferase | - |
LQ191_RS21860 | 4632365..4632751 | - | 387 | Protein_4303 | class I SAM-dependent methyltransferase | - |
LQ191_RS21865 (AI2946V1_4279) | 4632865..4633416 | - | 552 | WP_126488543.1 | N-acetyltransferase | Antitoxin |
LQ191_RS21870 (AI2946V1_4280) | 4633427..4633684 | - | 258 | WP_004110819.1 | YjhX family toxin | Toxin |
LQ191_RS21875 (AI2946V1_4281) | 4634266..4635450 | + | 1185 | WP_004099225.1 | mannonate dehydratase | - |
LQ191_RS21880 (AI2946V1_4282) | 4635525..4637000 | + | 1476 | WP_126488541.1 | fructuronate reductase | - |
LQ191_RS21885 (AI2946V1_4283) | 4637136..4637912 | + | 777 | WP_017146569.1 | Uxu operon transcriptional regulator | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | flank | IS/Tn | - | - | 4627423..4628583 | 1160 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 86 a.a. Molecular weight: 9552.07 Da Isoelectric Point: 11.1381
>T296056 WP_004110819.1 NZ_OW968280:c4633684-4633427 [Klebsiella oxytoca]
MNLSRQEQRTLHVLAKGGRIAHIRDASGRVTSVECYSREGLLLSDCTLAVFKKLKTKKLIKSVNGQPYRINTTGLNNVRA
QLDNR
MNLSRQEQRTLHVLAKGGRIAHIRDASGRVTSVECYSREGLLLSDCTLAVFKKLKTKKLIKSVNGQPYRINTTGLNNVRA
QLDNR
Download Length: 258 bp
Antitoxin
Download Length: 184 a.a. Molecular weight: 20133.09 Da Isoelectric Point: 6.7176
>AT296056 WP_126488543.1 NZ_OW968280:c4633416-4632865 [Klebsiella oxytoca]
MTNHNFTFHITSERDADDIREVETRAFGFSKEADLVAALLNDESAHPSLSLLAKHNGKAVGHILFTLATFKGESDSPMMH
ILAPLAVVPEYQGMGVGGLLIQSGIEHLKAMGSLAVFVLGHATYYPRHGFEPCAGDKGYPAPYPIPEEHKACWMLQRLSS
RPLGITGQIQCARALMKPEHWRE
MTNHNFTFHITSERDADDIREVETRAFGFSKEADLVAALLNDESAHPSLSLLAKHNGKAVGHILFTLATFKGESDSPMMH
ILAPLAVVPEYQGMGVGGLLIQSGIEHLKAMGSLAVFVLGHATYYPRHGFEPCAGDKGYPAPYPIPEEHKACWMLQRLSS
RPLGITGQIQCARALMKPEHWRE
Download Length: 552 bp
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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