Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yjhX-yjhQ/YjhX(toxin)
Location 4606914..4607733 Replicon chromosome
Accession NZ_OW849470
Organism Klebsiella oxytoca isolate 325

Toxin (Protein)


Gene name yjhX Uniprot ID -
Locus tag LQ213_RS21680 Protein ID WP_064372979.1
Coordinates 4607476..4607733 (-) Length 86 a.a.

Antitoxin (Protein)


Gene name yjhQ Uniprot ID -
Locus tag LQ213_RS21675 Protein ID WP_230186121.1
Coordinates 4606914..4607465 (-) Length 184 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LQ213_RS21655 (AI2699V1_4223) 4602243..4603640 + 1398 WP_230186119.1 MFS transporter -
LQ213_RS21660 (AI2699V1_4224) 4603764..4605104 + 1341 WP_230186120.1 carbohydrate porin -
LQ213_RS21665 4605268..4606032 - 765 WP_227629826.1 class I SAM-dependent methyltransferase -
LQ213_RS21670 4606426..4606800 - 375 Protein_4265 class I SAM-dependent methyltransferase -
LQ213_RS21675 (AI2699V1_4226) 4606914..4607465 - 552 WP_230186121.1 N-acetyltransferase Antitoxin
LQ213_RS21680 (AI2699V1_4227) 4607476..4607733 - 258 WP_064372979.1 YjhX family toxin Toxin
LQ213_RS21685 (AI2699V1_4228) 4608315..4609499 + 1185 WP_230186122.1 mannonate dehydratase -
LQ213_RS21690 (AI2699V1_4229) 4609574..4611049 + 1476 WP_004110817.1 fructuronate reductase -
LQ213_RS21695 (AI2699V1_4230) 4611185..4611961 + 777 WP_017146569.1 Uxu operon transcriptional regulator -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Putative toxin of bacterial toxin-antitoxin pair

(1-85)

Antitoxin

GNAT domain

(17-130)


Sequences

Toxin        


Download         Length: 86 a.a.        Molecular weight: 9564.12 Da        Isoelectric Point: 11.1381

>T295710 WP_064372979.1 NZ_OW849470:c4607733-4607476 [Klebsiella oxytoca]
MNLSRQEQRTLHVLAKGGRIAHIRDASGRVISVECYSREGLLLSDCTLAVFKKLKTKKLIKSVNGQPYRINTTGLNNVRA
QLDNR

Download         Length: 258 bp

Antitoxin


Download         Length: 184 a.a.        Molecular weight: 20195.04 Da        Isoelectric Point: 6.7181

>AT295710 WP_230186121.1 NZ_OW849470:c4607465-4606914 [Klebsiella oxytoca]
MTNHNFTFHITSERDADDIREVETRAFGFSKEADLVADLLNDESAHPSLSLLAKHNGKAVGHILFTLATFKGESDSPMMH
ILAPLAVVPEYQGVGVGGLLIQRGIEHLKAAGSEAVFVLGHAAYYPRHGFEPCAGDKGYPAPYPIPEEHKACWMLQRLSS
RPLGRIGQIQCARALMKPEHWRE

Download         Length: 552 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References