295355

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) PhRel-ATphRel/-
Location 2817661..2818711 Replicon chromosome
Accession NZ_OW052571
Organism Mycobacterium tuberculosis strain Lineage 4.1 isolate Mycobacterium tuberculosis

Toxin (Protein)


Gene name phRel Uniprot ID G0TIH2
Locus tag MR179_RS13155 Protein ID WP_003407164.1
Coordinates 2817890..2818711 (-) Length 274 a.a.

Antitoxin (Protein)


Gene name ATphRel Uniprot ID A0A7U4BTV8
Locus tag MR179_RS13150 Protein ID WP_003407167.1
Coordinates 2817661..2817897 (-) Length 79 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MR179_RS13135 2813631..2815100 - 1470 WP_003900326.1 cytochrome b5 domain-containing protein -
MR179_RS13140 2815296..2816081 - 786 WP_003407180.1 lipoprotein LprF -
MR179_RS13145 2816384..2817589 + 1206 WP_003898846.1 serine hydrolase domain-containing protein -
MR179_RS13150 2817661..2817897 - 237 WP_003407167.1 hypothetical protein Antitoxin
MR179_RS13155 2817890..2818711 - 822 WP_003407164.1 GTP pyrophosphokinase family protein Toxin
MR179_RS13160 2818932..2819318 + 387 WP_003898845.1 anti-sigma-F factor antagonist RsfA -
MR179_RS13165 2819457..2821418 + 1962 WP_003407159.1 sigma-F factor regulator -
MR179_RS13170 2821709..2822494 + 786 WP_003407157.1 membrane protein -
MR179_RS13175 2822491..2823153 + 663 WP_003407152.1 membrane protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RelA/SpoT

(76-174)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 274 a.a.        Molecular weight: 30100.10 Da        Isoelectric Point: 5.8187

>T295355 WP_003407164.1 NZ_OW052571:c2818711-2817890 [Mycobacterium tuberculosis]
VVVALVGSAIVDLHSRPPWSNNAVRRLGVALRDGVDPPVDCPSYAEVMLWHADLAAEVQDRIEGRSWSASELLVTSRAKS
QDTLLAKLRRRPYLQLNTIQDIAGVRIDADLLLGEQTRLAREIADHFGADQPAIHDLRDHPHAGYRAVHVWLRLPAGRVE
IQIRTILQSLWANFYELLADAYGRGIRYDERPEQLAAGVVPAQLQELVGVMQDASADLAMHEAEWQHCAEIEYPGQRAMA
LGEASKNKATVLATTKFRLERAINEAESAGGGG

Download         Length: 822 bp

Antitoxin


Download         Length: 79 a.a.        Molecular weight: 8830.90 Da        Isoelectric Point: 7.3178

>AT295355 WP_003407167.1 NZ_OW052571:c2817897-2817661 [Mycobacterium tuberculosis]
VGEVAGYVVEYNRRTHVRRITEFATPQEAMEHRLKLEAERTDSNIEIVALVSKSLGTLKQTHSRYFTGEELNVGNGAR

Download         Length: 237 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB G0TIH2

Antitoxin

Source ID Structure
AlphaFold DB A0A7U4BTV8

References