Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/Cpta(toxin)
Location 795599..796256 Replicon chromosome
Accession NZ_OV408202
Organism Klebsiella pneumoniae isolate CNR146C9

Toxin (Protein)


Gene name cptA Uniprot ID W8UCT0
Locus tag NBX86_RS03945 Protein ID WP_002916310.1
Coordinates 795846..796256 (+) Length 137 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID W8UQ37
Locus tag NBX86_RS03940 Protein ID WP_002916312.1
Coordinates 795599..795865 (+) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NBX86_RS03915 (790807) 790807..792240 - 1434 WP_002916322.1 6-phospho-beta-glucosidase BglA -
NBX86_RS03920 (792359) 792359..793087 - 729 WP_002916321.1 MurR/RpiR family transcriptional regulator -
NBX86_RS03925 (793137) 793137..793448 + 312 WP_004144734.1 N(4)-acetylcytidine aminohydrolase -
NBX86_RS03930 (793612) 793612..794271 + 660 WP_004174454.1 hemolysin III family protein -
NBX86_RS03935 (794370) 794370..795353 - 984 WP_023286864.1 tRNA-modifying protein YgfZ -
NBX86_RS03940 (795599) 795599..795865 + 267 WP_002916312.1 FAD assembly factor SdhE Antitoxin
NBX86_RS03945 (795846) 795846..796256 + 411 WP_002916310.1 protein YgfX Toxin
NBX86_RS03950 (796263) 796263..796784 - 522 WP_002916308.1 flavodoxin FldB -
NBX86_RS03955 (796885) 796885..797781 + 897 WP_004144729.1 site-specific tyrosine recombinase XerD -
NBX86_RS03960 (797804) 797804..798517 + 714 WP_004174456.1 bifunctional protein-disulfide isomerase/oxidoreductase DsbC -
NBX86_RS03965 (798523) 798523..800256 + 1734 WP_004149758.1 single-stranded-DNA-specific exonuclease RecJ -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Inner membrane protein YgfX

(3-132)

Antitoxin

Flavinator of succinate dehydrogenase

(7-79)


Sequences

Toxin        


Download         Length: 137 a.a.        Molecular weight: 16049.85 Da        Isoelectric Point: 11.4778

>T295005 WP_002916310.1 NZ_OV408202:795846-796256 [Klebsiella pneumoniae]
VVLWQSDLRISWRAQWFSLLLHGVVAALVLLVPWPLSYTPIWLLLLSLVVFDCVRSQRRIHARRGEIKLLTDSRLRWQNA
EWEILGTPWVINSGMLLRLRHVDTRRGQHLWLAADSMDAGEWRDLRRLVLQKPAQE

Download         Length: 411 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 10480.98 Da        Isoelectric Point: 5.1116

>AT295005 WP_002916312.1 NZ_OV408202:795599-795865 [Klebsiella pneumoniae]
MDINNKARIHWACRRGMRELDISIMPFFEYEYDTLSDADKQLFIRLLENDDPDLFNWLMNHGKPADAELQRMVTLIQTRN
RERGPVAI

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0H3GSW7

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GY41

References