Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) tsbAT/-
Location 473921..474697 Replicon chromosome
Accession NZ_LT992475
Organism Staphylococcus aureus isolate 20_LA_415

Toxin (Protein)


Gene name tsbT Uniprot ID X5E2E6
Locus tag DXE41_RS02795 Protein ID WP_000031108.1
Coordinates 474545..474697 (+) Length 51 a.a.

Antitoxin (Protein)


Gene name tsbA Uniprot ID W8U4V4
Locus tag DXE41_RS02790 Protein ID WP_001251224.1
Coordinates 473921..474520 (+) Length 200 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DXE41_RS02770 469837..471294 + 1458 WP_000649908.1 ABC transporter permease subunit -
DXE41_RS02775 471287..472009 + 723 WP_031774878.1 amino acid ABC transporter ATP-binding protein -
DXE41_RS02780 472160..473287 + 1128 WP_000379980.1 tRNA epoxyqueuosine(34) reductase QueG -
DXE41_RS02785 473292..473762 + 471 WP_000181394.1 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL -
DXE41_RS02790 473921..474520 + 600 WP_001251224.1 glucosamine-6-phosphate isomerase Antitoxin
DXE41_RS02795 474545..474697 + 153 WP_000031108.1 hypothetical protein Toxin
DXE41_RS02805 475240..475635 + 396 WP_000901018.1 hypothetical protein -
DXE41_RS02810 475831..477216 + 1386 WP_000116238.1 class II fumarate hydratase -
DXE41_RS02815 477671..478492 - 822 WP_000669380.1 RluA family pseudouridine synthase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Glucosamine-6-phosphate isomerase

(124-196)


Sequences

Toxin        


Download         Length: 51 a.a.        Molecular weight: 5936.28 Da        Isoelectric Point: 3.8962

>T294303 WP_000031108.1 NZ_LT992475:474545-474697 [Staphylococcus aureus]
MSKDKDPKLNYHEEENSMVTDFEDLKELGKEMEQISDQNDQEKNSEEDSQ

Download         Length: 153 bp

Antitoxin


Download         Length: 200 a.a.        Molecular weight: 22343.47 Da        Isoelectric Point: 5.1445

>AT294303 WP_001251224.1 NZ_LT992475:473921-474520 [Staphylococcus aureus]
MAMNFKVFDNSQLVAEYAADIIRKQFNNNPTTIAGFHLDTDQAPVLDELKKNVEKHAVDFSQINILDYDDKKSYFEALGV
PAGQVYPIAYEKDAIELIADKIKTKENKGKLTLQVVSIDEQGKLNVSIRQGLMEAREIFLVVTGANKRDVVEKLYQENGK
TSFEPADLKAHRMVNVILDKEAAAGLPEDVKAYFTSRFA

Download         Length: 600 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB X5E2E6

Antitoxin

Source ID Structure
AlphaFold DB W8U4V4

References