Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) TsdAT/-
Location 1628383..1628897 Replicon chromosome
Accession NZ_LT992460
Organism Staphylococcus aureus isolate 9_LA_281

Toxin (Protein)


Gene name TsdT Uniprot ID T1YA99
Locus tag DXE39_RS08450 Protein ID WP_000581792.1
Coordinates 1628688..1628897 (+) Length 70 a.a.

Antitoxin (Protein)


Gene name TsdA Uniprot ID W8UW13
Locus tag DXE39_RS08445 Protein ID WP_000138932.1
Coordinates 1628383..1628676 (+) Length 98 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DXE39_RS08425 1624146..1625461 + 1316 Protein_1570 ISL3 family transposase -
DXE39_RS08430 1625458..1625778 - 321 WP_001825748.1 hypothetical protein -
DXE39_RS08435 1626058..1626705 - 648 WP_001187614.1 HD domain-containing protein -
DXE39_RS08440 1626733..1628217 - 1485 WP_000571550.1 cardiolipin synthase -
DXE39_RS08445 1628383..1628676 + 294 WP_000138932.1 copper-sensing transcriptional repressor CsoR Antitoxin
DXE39_RS08450 1628688..1628897 + 210 WP_000581792.1 heavy-metal-associated domain-containing protein Toxin
DXE39_RS08455 1629025..1629162 + 138 WP_000828354.1 hypothetical protein -
DXE39_RS08460 1629426..1630628 - 1203 WP_001109939.1 rod shape-determining protein RodA -
DXE39_RS08465 1630946..1632016 + 1071 WP_000159641.1 D-alanine--D-alanine ligase -
DXE39_RS08470 1632031..1633386 + 1356 WP_000611457.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Heavy metal-associated domain, HMA

(23-66)

Antitoxin

Metal-sensitive transcriptional repressor

(14-92)


Sequences

Toxin        


Download         Length: 70 a.a.        Molecular weight: 7843.77 Da        Isoelectric Point: 4.1008

>T294077 WP_000581792.1 NZ_LT992460:1628688-1628897 [Staphylococcus aureus]
MIHQNTIYTAGIETEEQVSQLTERISNMIGVHQVNINIIDGQVTVSYETPANLNSIEKEIYDEGYKIVF

Download         Length: 210 bp

Antitoxin


Download         Length: 98 a.a.        Molecular weight: 11197.82 Da        Isoelectric Point: 6.2243

>AT294077 WP_000138932.1 NZ_LT992460:1628383-1628676 [Staphylococcus aureus]
MTEQDNAHHSEQIKTNLKSRLNRIEGQVRAINRMIEEDVYCDDVLTQIRATRSALNSVAIKLLEQHMKSCIMNKVNQGAQ
EEAMEELLVTFQKLIKD

Download         Length: 294 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 6FF1

Antitoxin

Source ID Structure
AlphaFold DB W8UW13

References