Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | TsdAT/- |
Location | 1290182..1290696 | Replicon | chromosome |
Accession | NZ_LT992458 | ||
Organism | Staphylococcus aureus isolate 7_4623 |
Toxin (Protein)
Gene name | TsdT | Uniprot ID | T1YA99 |
Locus tag | DXE63_RS06630 | Protein ID | WP_000581792.1 |
Coordinates | 1290487..1290696 (+) | Length | 70 a.a. |
Antitoxin (Protein)
Gene name | TsdA | Uniprot ID | W8UW13 |
Locus tag | DXE63_RS06625 | Protein ID | WP_000138932.1 |
Coordinates | 1290182..1290475 (+) | Length | 98 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
DXE63_RS06605 | 1285945..1287260 | + | 1316 | Protein_1227 | ISL3 family transposase | - |
DXE63_RS06610 | 1287257..1287577 | - | 321 | WP_001825748.1 | hypothetical protein | - |
DXE63_RS06615 | 1287857..1288504 | - | 648 | WP_001187614.1 | HD domain-containing protein | - |
DXE63_RS06620 | 1288532..1290016 | - | 1485 | WP_000571550.1 | cardiolipin synthase | - |
DXE63_RS06625 | 1290182..1290475 | + | 294 | WP_000138932.1 | copper-sensing transcriptional repressor CsoR | Antitoxin |
DXE63_RS06630 | 1290487..1290696 | + | 210 | WP_000581792.1 | heavy-metal-associated domain-containing protein | Toxin |
DXE63_RS06635 | 1290824..1290961 | + | 138 | WP_000828354.1 | hypothetical protein | - |
DXE63_RS06640 | 1291225..1292427 | - | 1203 | WP_001109939.1 | rod shape-determining protein RodA | - |
DXE63_RS06645 | 1292745..1293815 | + | 1071 | WP_000159641.1 | D-alanine--D-alanine ligase | - |
DXE63_RS06650 | 1293830..1295185 | + | 1356 | WP_000611457.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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