Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YefM-YoeB
Location 1831381..1831889 Replicon chromosome
Accession NZ_LT906434
Organism Neisseria zoodegmatis strain NCTC12230

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag CKV66_RS08640 Protein ID WP_085363030.1
Coordinates 1831381..1831635 (+) Length 85 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag CKV66_RS08645 Protein ID WP_085363031.1
Coordinates 1831632..1831889 (+) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CKV66_RS08600 1826749..1827069 - 321 WP_085363022.1 hypothetical protein -
CKV66_RS08605 1827059..1827421 - 363 WP_085363023.1 hypothetical protein -
CKV66_RS08615 1828222..1828818 - 597 WP_085363025.1 helix-turn-helix domain-containing protein -
CKV66_RS08620 1828937..1829137 + 201 WP_085363026.1 helix-turn-helix domain-containing protein -
CKV66_RS08625 1829143..1829937 + 795 WP_085363027.1 hypothetical protein -
CKV66_RS08635 1830450..1830857 - 408 WP_085363029.1 hypothetical protein -
CKV66_RS08640 1831381..1831635 + 255 WP_085363030.1 type II toxin-antitoxin system prevent-host-death family antitoxin Toxin
CKV66_RS08645 1831632..1831889 + 258 WP_085363031.1 Txe/YoeB family addiction module toxin Antitoxin
CKV66_RS08650 1831986..1833083 - 1098 WP_085363032.1 traS protein -
CKV66_RS08655 1833158..1833721 - 564 WP_085363033.1 plasmid mobilization relaxosome protein MobC -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-72)

Antitoxin

Toxin YoeB

(1-84)


Sequences

Toxin        


Download         Length: 85 a.a.        Molecular weight: 9555.83 Da        Isoelectric Point: 6.2207

>T293674 WP_085363030.1 NZ_LT906434:1831381-1831635 [Neisseria zoodegmatis]
MDVMSYTAFRAELAGTLDKVVENHKPVLITRQNGKPAVVMSLEDFHAYEETAYLTASPKNAERLNRAVEQIRQNQAIRHE
LIES

Download         Length: 255 bp

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 10438.00 Da        Isoelectric Point: 8.8811

>AT293674 WP_085363031.1 NZ_LT906434:1831632-1831889 [Neisseria zoodegmatis]
MILAWADTAWEDYLYWQAVDKKNLKRINLLIKDIQRNPFTGVGNPEPLKHNWQGFWSRRIDLEHRLVYQIRDEMLFIAQC
RYHYS

Download         Length: 258 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References