293451

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) pasABC/RelE-HTH
Location 1316812..1317307 Replicon chromosome
Accession NZ_LT706985
Organism Propionimicrobium sp. Marseille-P3275 strain Marseille-P3275T

Toxin (Protein)


Gene name pasB Uniprot ID -
Locus tag CZ356_RS06310 Protein ID WP_076389876.1
Coordinates 1316812..1317075 (-) Length 88 a.a.

Antitoxin (Protein)


Gene name pasA Uniprot ID -
Locus tag CZ356_RS06315 Protein ID WP_076389167.1
Coordinates 1317059..1317307 (-) Length 83 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CZ356_RS06290 1313236..1313691 + 456 WP_076389164.1 cupin domain-containing protein -
CZ356_RS06295 1313855..1315957 - 2103 WP_162272872.1 hypothetical protein -
CZ356_RS06300 1316151..1316372 + 222 WP_197684258.1 type II toxin-antitoxin system HicA family toxin -
CZ356_RS06305 1316369..1316758 + 390 WP_083655415.1 hypothetical protein -
CZ356_RS06310 1316812..1317075 - 264 WP_076389876.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
CZ356_RS06315 1317059..1317307 - 249 WP_076389167.1 ribbon-helix-helix domain-containing protein Antitoxin
CZ356_RS06320 1317359..1319722 - 2364 WP_156874595.1 class C sortase -
CZ356_RS06325 1319811..1321346 - 1536 WP_076389169.1 SpaH/EbpB family LPXTG-anchored major pilin -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(9-86)

Antitoxin

Ribbon-helix-helix protein, CopG

(10-46)


Sequences

Toxin        


Download         Length: 88 a.a.        Molecular weight: 9935.71 Da        Isoelectric Point: 10.1761

>T293451 WP_076389876.1 NZ_LT706985:c1317075-1316812 [Propionimicrobium sp. Marseille-P3275]
MAWKIEVFAKADKSLRKLDRQVARKIVAALAELAELDDPRSRGKALTGNLVGLWRYRVGDYRLLCLIDDEVLVVLVVDVA
HRSKVYR

Download         Length: 264 bp

Antitoxin


Download         Length: 83 a.a.        Molecular weight: 9579.65 Da        Isoelectric Point: 4.7010

>AT293451 WP_076389167.1 NZ_LT706985:c1317307-1317059 [Propionimicrobium sp. Marseille-P3275]
MASEVHEKPTSVRLSARTMERLDDLAQRTGRSKSYYIRQAVEDSIDRLIWEYDVLSTVEEYRAGRLKTYTLDEVSEHLGL
ED

Download         Length: 249 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References