Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/YafQ-DinJ |
Location | 586196..586720 | Replicon | chromosome |
Accession | NZ_LT706985 | ||
Organism | Propionimicrobium sp. Marseille-P3275 strain Marseille-P3275T |
Toxin (Protein)
Gene name | relE | Uniprot ID | - |
Locus tag | CZ356_RS09790 | Protein ID | WP_197684216.1 |
Coordinates | 586196..586372 (-) | Length | 59 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | - |
Locus tag | CZ356_RS02685 | Protein ID | WP_076388501.1 |
Coordinates | 586466..586720 (-) | Length | 85 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
CZ356_RS02675 | 582099..585461 | + | 3363 | WP_076388499.1 | AAA family ATPase | - |
CZ356_RS09790 | 586196..586372 | - | 177 | WP_197684216.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin |
CZ356_RS02685 | 586466..586720 | - | 255 | WP_076388501.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
CZ356_RS02690 | 586890..587777 | - | 888 | Protein_529 | phage tail protein | - |
CZ356_RS02695 | 587934..588878 | + | 945 | WP_076388503.1 | Abi family protein | - |
CZ356_RS02700 | 589062..589457 | - | 396 | Protein_531 | hypothetical protein | - |
CZ356_RS02705 | 589621..590034 | + | 414 | WP_076388505.1 | DUF4418 family protein | - |
CZ356_RS02710 | 590119..591249 | + | 1131 | WP_162272861.1 | ABC transporter permease | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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