Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 3501048..3501701 Replicon chromosome
Accession NZ_LT605059
Organism Acinetobacter baumannii strain NCTC7364

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag B5474_RS16685 Protein ID WP_079549007.1
Coordinates 3501048..3501437 (-) Length 130 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID -
Locus tag B5474_RS16690 Protein ID WP_001288211.1
Coordinates 3501444..3501701 (-) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
B5474_RS16670 3496166..3498361 - 2196 WP_001158905.1 TRAP transporter large permease subunit -
B5474_RS16675 3498549..3499115 - 567 WP_000651536.1 rhombosortase -
B5474_RS16680 3499193..3500278 - 1086 WP_079549006.1 hypothetical protein -
B5474_RS16685 3501048..3501437 - 390 WP_079549007.1 hypothetical protein Toxin
B5474_RS16690 3501444..3501701 - 258 WP_001288211.1 succinate dehydrogenase assembly factor 2 Antitoxin
B5474_RS16695 3501889..3503061 + 1173 WP_079549008.1 acyl-CoA dehydrogenase family protein -
B5474_RS16700 3503110..3504600 - 1491 WP_000415132.1 NAD(P)/FAD-dependent oxidoreductase -
B5474_RS16705 3504782..3505159 - 378 WP_001216380.1 50S ribosomal protein L17 -
B5474_RS16710 3505178..3506185 - 1008 WP_000198631.1 DNA-directed RNA polymerase subunit alpha -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(10-80)


Sequences

Toxin        


Download         Length: 130 a.a.        Molecular weight: 15701.12 Da        Isoelectric Point: 10.4623

>T293289 WP_079549007.1 NZ_LT605059:c3501437-3501048 [Acinetobacter baumannii]
MINHLNFKLKYSRFSIIFQFFIGLSLAILFYQLMPLLWWLVVISLLFISFIFFLKRPQLAQIAYLDKKLWSLAYHSQNTI
SRVKILKIIDYQIFIVIYFEGHKKLISIIWFDQMSLAEWKKLKILEKLY

Download         Length: 390 bp

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 10344.80 Da        Isoelectric Point: 4.4909

>AT293289 WP_001288211.1 NZ_LT605059:c3501701-3501444 [Acinetobacter baumannii]
MSEEMTLEERKVIYRARRGLKEIDVYFDPYVKNYYLKADPAEKALFAELVEQEDPDLLDWFMEVSEPPRTELRDFIYKLK
YYVHG

Download         Length: 258 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References