Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YoeB-YefM
Location 3582088..3582593 Replicon chromosome
Accession NZ_LT604072
Organism Xanthomonas translucens pv. translucens DSM 18974 isolate peng1

Toxin (Protein)


Gene name relE Uniprot ID A0A1C3TRG2
Locus tag BFP94_RS14755 Protein ID WP_003479798.1
Coordinates 3582336..3582593 (+) Length 86 a.a.

Antitoxin (Protein)


Gene name relE Uniprot ID A0A1C3TRJ9
Locus tag BFP94_RS14750 Protein ID WP_003468816.1
Coordinates 3582088..3582339 (+) Length 84 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BFP94_RS14725 3577159..3578394 + 1236 WP_065899003.1 citrate synthase family protein -
BFP94_RS14730 3579561..3580115 + 555 WP_003479802.1 hypothetical protein -
BFP94_RS14735 3580151..3580594 - 444 WP_003479801.1 nuclear transport factor 2 family protein -
BFP94_RS14740 3580716..3581438 + 723 WP_003479800.1 ArsR family transcriptional regulator -
BFP94_RS14745 3581435..3581979 - 545 Protein_3004 endonuclease -
BFP94_RS14750 3582088..3582339 + 252 WP_003468816.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin
BFP94_RS14755 3582336..3582593 + 258 WP_003479798.1 Txe/YoeB family addiction module toxin Toxin
BFP94_RS14765 3583228..3583581 - 354 WP_003479797.1 PilZ domain-containing protein -
BFP94_RS14770 3583578..3584555 - 978 WP_003479796.1 DNA polymerase III subunit delta' -
BFP94_RS14775 3584552..3585220 - 669 WP_003479795.1 dTMP kinase -
BFP94_RS14780 3585217..3586284 - 1068 WP_172837969.1 endolytic transglycosylase MltG -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(5-84)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-74)


Sequences

Toxin        


Download         Length: 86 a.a.        Molecular weight: 10156.61 Da        Isoelectric Point: 9.7381

>T293287 WP_003479798.1 NZ_LT604072:3582336-3582593 [Xanthomonas translucens pv. translucens DSM 18974]
VTLQFSDNAWEDDLYWQQTDKKMLKRINDLIKAIQRDPFQGVGKPERLRHALAGYWSRRINDEHRIVYKVEAGVLLIAQV
RYHYA

Download         Length: 258 bp

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9281.56 Da        Isoelectric Point: 5.1186

>AT293287 WP_003468816.1 NZ_LT604072:3582088-3582339 [Xanthomonas translucens pv. translucens DSM 18974]
MDTITYSAARAALADTMERVVNNHEPVIITRSREQSVVMLSLEDYKAMEETAYLLRSPKSAQRLLESIAQLEAGRGKARD
LAE

Download         Length: 252 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A1C3TRG2

Antitoxin

Source ID Structure
AlphaFold DB A0A1C3TRJ9

References