Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) tsbAT/-
Location 2026612..2027388 Replicon chromosome
Accession NZ_LS483484
Organism Staphylococcus aureus strain NCTC13277

Toxin (Protein)


Gene name tsbT Uniprot ID X5E2E6
Locus tag DQL77_RS10195 Protein ID WP_000031108.1
Coordinates 2026612..2026764 (-) Length 51 a.a.

Antitoxin (Protein)


Gene name tsbA Uniprot ID A0A0D1IYN8
Locus tag DQL77_RS10200 Protein ID WP_001251219.1
Coordinates 2026789..2027388 (-) Length 200 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DQL77_RS10180 2022758..2023579 + 822 WP_000669380.1 RluA family pseudouridine synthase -
DQL77_RS10185 2024035..2025420 - 1386 WP_000116227.1 class II fumarate hydratase -
DQL77_RS10190 2025616..2026011 - 396 WP_000901019.1 hypothetical protein -
DQL77_RS10195 2026612..2026764 - 153 WP_000031108.1 hypothetical protein Toxin
DQL77_RS10200 2026789..2027388 - 600 WP_001251219.1 glucosamine-6-phosphate isomerase Antitoxin
DQL77_RS10205 2027547..2028017 - 471 WP_000181394.1 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL -
DQL77_RS10210 2028022..2029149 - 1128 WP_000379980.1 tRNA epoxyqueuosine(34) reductase QueG -
DQL77_RS10215 2029300..2030022 - 723 WP_000590809.1 amino acid ABC transporter ATP-binding protein -
DQL77_RS10220 2030015..2031472 - 1458 WP_000649898.1 ABC transporter permease subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Glucosamine-6-phosphate isomerase

(124-196)


Sequences

Toxin        


Download         Length: 51 a.a.        Molecular weight: 5936.28 Da        Isoelectric Point: 3.8962

>T292629 WP_000031108.1 NZ_LS483484:c2026764-2026612 [Staphylococcus aureus]
MSKDKDPKLNYHEEENSMVTDFEDLKELGKEMEQISDQNDQEKNSEEDSQ

Download         Length: 153 bp

Antitoxin


Download         Length: 200 a.a.        Molecular weight: 22357.50 Da        Isoelectric Point: 5.1445

>AT292629 WP_001251219.1 NZ_LS483484:c2027388-2026789 [Staphylococcus aureus]
MAMNFKVFDNSQLVAEYAADIIRKQFNNNPTTIAGFHLDTDQAPVLDELKKNIEKHAVDFSQINILDYDDKKSYFEALGV
PAGQVYPIAYEKDAIELIADKIKTKENKGKLTLQVVSIDEQGKLNVSIRQGLMEAREIFLVVTGANKRDVVEKLYQENGK
TSFEPADLKAHRMVNVILDKEAAAGLPEDVKAYFTSRFA

Download         Length: 600 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB X5E2E6

Antitoxin

Source ID Structure
AlphaFold DB A0A0D1IYN8

References