Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/YafQ-DinJ |
| Location | 146153..146629 | Replicon | chromosome |
| Accession | NZ_LS483381 | ||
| Organism | Streptococcus sobrinus strain NCTC10921 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | - |
| Locus tag | DQM69_RS00855 | Protein ID | WP_002959484.1 |
| Coordinates | 146153..146344 (-) | Length | 64 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | U2KLJ0 |
| Locus tag | DQM69_RS00860 | Protein ID | WP_002959487.1 |
| Coordinates | 146348..146629 (-) | Length | 94 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM69_RS00830 | 141639..142205 | + | 567 | WP_019781805.1 | DUF1211 domain-containing protein | - |
| DQM69_RS10430 | 142559..142702 | - | 144 | WP_002959475.1 | hypothetical protein | - |
| DQM69_RS00835 | 142692..143105 | - | 414 | WP_019781806.1 | hypothetical protein | - |
| DQM69_RS00840 | 143187..143909 | + | 723 | WP_019776886.1 | ABC transporter ATP-binding protein | - |
| DQM69_RS00845 | 143914..145060 | + | 1147 | Protein_125 | ABC transporter permease | - |
| DQM69_RS00850 | 145284..145904 | + | 621 | WP_002959483.1 | TetR/AcrR family transcriptional regulator | - |
| DQM69_RS10505 | 146082..146174 | - | 93 | WP_197711882.1 | type II toxin-antitoxin system YafQ family toxin | - |
| DQM69_RS00855 | 146153..146344 | - | 192 | WP_002959484.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin |
| DQM69_RS00860 | 146348..146629 | - | 282 | WP_002959487.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
| DQM69_RS00865 | 146786..147652 | - | 867 | WP_002959489.1 | LysR family transcriptional regulator | - |
| DQM69_RS00870 | 147763..148623 | + | 861 | WP_002959490.1 | aldo/keto reductase | - |
| DQM69_RS00875 | 148723..149085 | - | 363 | WP_002959493.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Integrative and Conjugative Element | - | - | 125488..170667 | 45179 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|