Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/YafQ-DinJ |
Location | 187863..188414 | Replicon | chromosome |
Accession | NZ_LS483349 | ||
Organism | Streptococcus mutans strain NCTC10449 |
Toxin (Protein)
Gene name | relE | Uniprot ID | - |
Locus tag | DQM59_RS01010 | Protein ID | WP_002280073.1 |
Coordinates | 187863..188141 (-) | Length | 93 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | - |
Locus tag | DQM59_RS01015 | Protein ID | WP_002280072.1 |
Coordinates | 188142..188414 (-) | Length | 91 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
DQM59_RS00975 | 183970..184224 | - | 255 | WP_002270995.1 | Txe/YoeB family addiction module toxin | - |
DQM59_RS00980 | 184217..184483 | - | 267 | WP_002270994.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
DQM59_RS00985 | 184747..186405 | - | 1659 | WP_002280077.1 | transposase | - |
DQM59_RS00990 | 186412..186822 | - | 411 | WP_002280076.1 | DUF961 family protein | - |
DQM59_RS00995 | 186845..187159 | - | 315 | WP_000406626.1 | hypothetical protein | - |
DQM59_RS01005 | 187498..187734 | - | 237 | WP_002280074.1 | hypothetical protein | - |
DQM59_RS01010 | 187863..188141 | - | 279 | WP_002280073.1 | type II toxin-antitoxin system YafQ family toxin | Toxin |
DQM59_RS01015 | 188142..188414 | - | 273 | WP_002280072.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
DQM59_RS01020 | 188566..189279 | + | 714 | WP_002280071.1 | hypothetical protein | - |
DQM59_RS01025 | 190044..190406 | + | 363 | WP_002280070.1 | helix-turn-helix transcriptional regulator | - |
DQM59_RS01030 | 190413..191264 | + | 852 | WP_002280069.1 | ImmA/IrrE family metallo-endopeptidase | - |
DQM59_RS01035 | 191284..191646 | - | 363 | WP_002280068.1 | hypothetical protein | - |
DQM59_RS01040 | 191734..193284 | - | 1551 | WP_002280067.1 | DNA cytosine methyltransferase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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