Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-YafN
Location 763830..764355 Replicon chromosome
Accession NZ_LS483250
Organism Moritella yayanosii strain DB21MT 5

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag MORIYA_RS03370 Protein ID WP_112712706.1
Coordinates 763830..764117 (-) Length 96 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag MORIYA_RS03375 Protein ID WP_112712708.1
Coordinates 764107..764355 (-) Length 83 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MORIYA_RS20720 758865..759083 + 219 WP_162629222.1 hypothetical protein -
MORIYA_RS03340 759089..759478 - 390 WP_112712698.1 nuclear transport factor 2 family protein -
MORIYA_RS20985 759887..760102 + 216 WP_197713352.1 hypothetical protein -
MORIYA_RS03350 760229..760955 + 727 Protein_648 transposase -
MORIYA_RS03355 761309..761800 + 492 WP_112712700.1 type VI secretion system amidase effector protein Tae4 -
MORIYA_RS03360 761797..762156 + 360 WP_112712702.1 hypothetical protein -
MORIYA_RS03365 762884..763750 + 867 WP_112712704.1 AraC family transcriptional regulator -
MORIYA_RS03370 763830..764117 - 288 WP_112712706.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
MORIYA_RS03375 764107..764355 - 249 WP_112712708.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin
MORIYA_RS03380 764763..765140 - 378 Protein_654 IS110 family transposase -
MORIYA_RS03390 766257..766730 - 474 Protein_655 MmgE/PrpD family protein -
MORIYA_RS03395 766882..768222 - 1341 Protein_656 YdiU family protein -
MORIYA_RS03400 768346..768993 - 648 WP_112712710.1 NifU family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Genomic island - - 761797..770233 8436
- flank IS/Tn - - 760340..760675 335


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(5-82)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 96 a.a.        Molecular weight: 10836.68 Da        Isoelectric Point: 10.4697

>T292129 WP_112712706.1 NZ_LS483250:c764117-763830 [Moritella yayanosii]
MTYELEFKKSALKEWKKLGATIQSQFKKKLTDILSNPHIESAKLSGGNELYKIKLRQVGYRLVYEVNDTVVTVTVISVGK
RDKGKIYTAAMNRIN

Download         Length: 288 bp

Antitoxin


Download         Length: 83 a.a.        Molecular weight: 9103.46 Da        Isoelectric Point: 4.2694

>AT292129 WP_112712708.1 NZ_LS483250:c764355-764107 [Moritella yayanosii]
MTTRILTEAAASISELKANPMKVALSAHGEAIAVLNRNEPAFYCIPADTYEFMMDYIEDLELLAIVEQRKNEASVKVSLN
DL

Download         Length: 249 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References