Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | stbDE/ParE-YafN |
Location | 97930..98452 | Replicon | plasmid 2 |
Accession | NZ_LR890692 | ||
Organism | Klebsiella pneumoniae isolate INF119-sc-2279930 |
Toxin (Protein)
Gene name | stbE | Uniprot ID | A0A9J6S4Z8 |
Locus tag | JMW99_RS25545 | Protein ID | WP_004187019.1 |
Coordinates | 98168..98452 (+) | Length | 95 a.a. |
Antitoxin (Protein)
Gene name | stbD | Uniprot ID | A0A2J4ZSR4 |
Locus tag | JMW99_RS25540 | Protein ID | WP_004187025.1 |
Coordinates | 97930..98178 (+) | Length | 83 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
JMW99_RS25515 | 93218..94012 | - | 795 | WP_004187050.1 | tetratricopeptide repeat protein | - |
JMW99_RS25520 | 94071..95417 | - | 1347 | WP_077254682.1 | ISNCY family transposase | - |
JMW99_RS25525 | 95626..96108 | - | 483 | WP_004098919.1 | GNAT family N-acetyltransferase | - |
JMW99_RS25530 | 96096..96362 | - | 267 | WP_032415032.1 | DUF1778 domain-containing protein | - |
JMW99_RS25535 | 96708..97676 | + | 969 | WP_000654811.1 | IS5 family transposase | - |
JMW99_RS25540 | 97930..98178 | + | 249 | WP_004187025.1 | plasmid stabilization protein | Antitoxin |
JMW99_RS25545 | 98168..98452 | + | 285 | WP_004187019.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
JMW99_RS25550 | 98468..98620 | - | 153 | WP_122985329.1 | hypothetical protein | - |
JMW99_RS25560 | 99852..100229 | + | 378 | WP_004114613.1 | IS66 family insertion sequence hypothetical protein | - |
JMW99_RS25565 | 100226..100573 | + | 348 | WP_004114612.1 | IS66 family insertion sequence element accessory protein TnpB | - |
JMW99_RS25570 | 100623..102160 | + | 1538 | Protein_100 | IS66 family transposase | - |
JMW99_RS25575 | 102198..102575 | + | 378 | Protein_101 | transposase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Conjugative plasmid | - | - | 1..233443 | 233443 | |
- | inside | IScluster/Tn | - | - | 94071..102575 | 8504 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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