Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/Cpta(toxin)
Location 783405..784062 Replicon chromosome
Accession NZ_LR890669
Organism Klebsiella pneumoniae isolate INF321-sc-2280120

Toxin (Protein)


Gene name cptA Uniprot ID W8UCT0
Locus tag JMW44_RS03915 Protein ID WP_002916310.1
Coordinates 783652..784062 (+) Length 137 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID W8UQ37
Locus tag JMW44_RS03910 Protein ID WP_002916312.1
Coordinates 783405..783671 (+) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JMW44_RS03885 778613..780046 - 1434 WP_032418366.1 6-phospho-beta-glucosidase -
JMW44_RS03890 780165..780893 - 729 WP_002916321.1 MurR/RpiR family transcriptional regulator -
JMW44_RS03895 780943..781254 + 312 WP_004144734.1 N(4)-acetylcytidine aminohydrolase -
JMW44_RS03900 781418..782077 + 660 WP_002916317.1 hemolysin III family protein -
JMW44_RS03905 782176..783159 - 984 WP_064179297.1 tRNA-modifying protein YgfZ -
JMW44_RS03910 783405..783671 + 267 WP_002916312.1 FAD assembly factor SdhE Antitoxin
JMW44_RS03915 783652..784062 + 411 WP_002916310.1 protein YgfX Toxin
JMW44_RS03920 784069..784590 - 522 WP_004144730.1 flavodoxin FldB -
JMW44_RS03925 784691..785587 + 897 WP_004144729.1 site-specific tyrosine recombinase XerD -
JMW44_RS03930 785610..786323 + 714 WP_002916301.1 bifunctional protein-disulfide isomerase/oxidoreductase DsbC -
JMW44_RS03935 786329..788062 + 1734 WP_004149758.1 single-stranded-DNA-specific exonuclease RecJ -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Inner membrane protein YgfX

(3-132)

Antitoxin

Flavinator of succinate dehydrogenase

(7-79)


Sequences

Toxin        


Download         Length: 137 a.a.        Molecular weight: 16049.85 Da        Isoelectric Point: 11.4778

>T291782 WP_002916310.1 NZ_LR890669:783652-784062 [Klebsiella pneumoniae]
VVLWQSDLRISWRAQWFSLLLHGVVAALVLLVPWPLSYTPIWLLLLSLVVFDCVRSQRRIHARRGEIKLLTDSRLRWQNA
EWEILGTPWVINSGMLLRLRHVDTRRGQHLWLAADSMDAGEWRDLRRLVLQKPAQE

Download         Length: 411 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 10480.98 Da        Isoelectric Point: 5.1116

>AT291782 WP_002916312.1 NZ_LR890669:783405-783671 [Klebsiella pneumoniae]
MDINNKARIHWACRRGMRELDISIMPFFEYEYDTLSDADKQLFIRLLENDDPDLFNWLMNHGKPADAELQRMVTLIQTRN
RERGPVAI

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0H3GSW7

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GY41

References