Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/Cpta(toxin)
Location 813049..813706 Replicon chromosome
Accession NZ_LR890356
Organism Klebsiella pneumoniae isolate INF231-sc-2280121

Toxin (Protein)


Gene name cptA Uniprot ID W8UCT0
Locus tag JMV88_RS04080 Protein ID WP_002916310.1
Coordinates 813296..813706 (+) Length 137 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID W8UQ37
Locus tag JMV88_RS04075 Protein ID WP_002916312.1
Coordinates 813049..813315 (+) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JMV88_RS04050 808205..809638 - 1434 WP_002916322.1 6-phospho-beta-glucosidase BglA -
JMV88_RS04055 809757..810485 - 729 WP_002916321.1 MurR/RpiR family transcriptional regulator -
JMV88_RS04060 810535..810846 + 312 WP_004144734.1 N(4)-acetylcytidine aminohydrolase -
JMV88_RS04065 811010..811669 + 660 WP_004889817.1 hemolysin III family protein -
JMV88_RS04070 811820..812803 - 984 WP_002916313.1 tRNA-modifying protein YgfZ -
JMV88_RS04075 813049..813315 + 267 WP_002916312.1 FAD assembly factor SdhE Antitoxin
JMV88_RS04080 813296..813706 + 411 WP_002916310.1 protein YgfX Toxin
JMV88_RS04085 813713..814234 - 522 WP_004144730.1 flavodoxin FldB -
JMV88_RS04090 814335..815231 + 897 WP_004144729.1 site-specific tyrosine recombinase XerD -
JMV88_RS04095 815254..815967 + 714 WP_002916301.1 bifunctional protein-disulfide isomerase/oxidoreductase DsbC -
JMV88_RS04100 815973..817706 + 1734 WP_004149758.1 single-stranded-DNA-specific exonuclease RecJ -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Inner membrane protein YgfX

(3-132)

Antitoxin

Flavinator of succinate dehydrogenase

(7-79)


Sequences

Toxin        


Download         Length: 137 a.a.        Molecular weight: 16049.85 Da        Isoelectric Point: 11.4778

>T290748 WP_002916310.1 NZ_LR890356:813296-813706 [Klebsiella pneumoniae]
VVLWQSDLRISWRAQWFSLLLHGVVAALVLLVPWPLSYTPIWLLLLSLVVFDCVRSQRRIHARRGEIKLLTDSRLRWQNA
EWEILGTPWVINSGMLLRLRHVDTRRGQHLWLAADSMDAGEWRDLRRLVLQKPAQE

Download         Length: 411 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 10480.98 Da        Isoelectric Point: 5.1116

>AT290748 WP_002916312.1 NZ_LR890356:813049-813315 [Klebsiella pneumoniae]
MDINNKARIHWACRRGMRELDISIMPFFEYEYDTLSDADKQLFIRLLENDDPDLFNWLMNHGKPADAELQRMVTLIQTRN
RERGPVAI

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0H3GSW7

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GY41

References