Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) TacT2-ataR/DUF1778(antitoxin)
Location 1664559..1665403 Replicon chromosome
Accession NZ_LR882967
Organism Planktothrix pseudagardhii strain No.713

Toxin (Protein)


Gene name TacT2 Uniprot ID -
Locus tag NMK36_RS07100 Protein ID WP_254173409.1
Coordinates 1664882..1665403 (+) Length 174 a.a.

Antitoxin (Protein)


Gene name ataR Uniprot ID -
Locus tag NMK36_RS07095 Protein ID WP_254173408.1
Coordinates 1664559..1664891 (+) Length 111 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NMK36_RS07080 (NO713_01408) 1660843..1661874 + 1032 WP_254173406.1 M48 family metalloprotease -
NMK36_RS07085 (NO713_01410) 1662032..1664098 - 2067 WP_254173407.1 AAA family ATPase -
NMK36_RS07090 (NO713_01411) 1664095..1664334 - 240 WP_193867872.1 hypothetical protein -
NMK36_RS07095 (NO713_01412) 1664559..1664891 + 333 WP_254173408.1 DUF1778 domain-containing protein Antitoxin
NMK36_RS07100 (NO713_01413) 1664882..1665403 + 522 WP_254173409.1 GNAT family N-acetyltransferase Toxin
NMK36_RS07105 (NO713_01414) 1665417..1666787 - 1371 WP_254173410.1 DNA phosphorothioation system restriction enzyme -
NMK36_RS07110 (NO713_01415) 1666932..1667360 - 429 WP_072717069.1 hypothetical protein -
NMK36_RS07115 (NO713_01416) 1667499..1667858 - 360 WP_072717068.1 hypothetical protein -
NMK36_RS07125 (NO713_01417) 1668145..1669314 + 1170 WP_245824150.1 DUF3326 domain-containing protein -
NMK36_RS07130 (NO713_01418) 1669396..1669923 + 528 WP_083579860.1 CPBP family intramembrane metalloprotease -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(79-150)

Antitoxin

Vibrio phage ICP1, Orf50

(30-104)


Sequences

Toxin        


Download         Length: 174 a.a.        Molecular weight: 19104.05 Da        Isoelectric Point: 7.8466

>T289989 WP_254173409.1 NZ_LR882967:1664882-1665403 [Planktothrix pseudagardhii]
VGLDRDRDKLSPPEKLNPSHQIDNFDSGNSQLDDWLKRRAWKNELEGASRTYVLCVGEVVVAYYCLANGAVARNIATGGV
RRNMPDPIPVMIIGRLAVDRQWQNQGIGRAMLRDAILRTLQAAEIAGIRAILVHAISEEAKLFYQKYGFAALESDPMILM
VKVSDAIISLGLG

Download         Length: 522 bp

Antitoxin


Download         Length: 111 a.a.        Molecular weight: 12502.28 Da        Isoelectric Point: 6.3237

>AT289989 WP_254173408.1 NZ_LR882967:1664559-1664891 [Planktothrix pseudagardhii]
MQLSLALTEVAAMYGSEAQQSVSQTREVTINIRAKQSQRDFIDQAAKIQGKSRSEFMLQTAYQKAQDVILSRCFFELDEG
KFQKFVDLLDAPPLQNEKLKALLTTKSPWD

Download         Length: 333 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References