Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) /BrnT(toxin)
Location 3245664..3246141 Replicon chromosome
Accession NZ_LR882944
Organism Planktothrix agardhii strain No.365

Toxin (Protein)


Gene name - Uniprot ID A0A1J1JEC9
Locus tag NMG87_RS14525 Protein ID WP_042155864.1
Coordinates 3245869..3246141 (-) Length 91 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID A0A1J1JHM1
Locus tag NMG87_RS14520 Protein ID WP_042155865.1
Coordinates 3245664..3245888 (-) Length 75 a.a.

Genomic Context

NMG87_RS14505NMG87_RS14530NMG87_RS14535NMG87_RS14485NMG87_RS14490NMG87_RS14495NMG87_RS14500NMG87_RS14510NMG87_RS14515NMG87_RS14520NMG87_RS14525
Location: 3243897..3244139 (243 bp)
Type: Others
Protein ID: WP_026786216.1
Location: 3247200..3249290 (2091 bp)
Type: Others
Protein ID: WP_235751906.1
Location: 3249357..3249494 (138 bp)
Type: Others
Protein ID: WP_235751905.1
Location: 3241920..3242312 (393 bp)
Type: Others
Protein ID: WP_227364941.1
Location: 3242284..3242688 (405 bp)
Type: Others
Protein ID: WP_042155868.1
Location: 3242798..3242935 (138 bp)
Type: Others
Protein ID: WP_071783091.1
Location: 3243052..3243561 (510 bp)
Type: Others
Protein ID: WP_026797999.1
Location: 3244263..3244910 (648 bp)
Type: Others
Protein ID: WP_254033714.1
Location: 3245101..3245442 (342 bp)
Type: Others
Protein ID: WP_235766172.1
Location: 3245664..3245888 (225 bp)
Type: Antitoxin
Protein ID: WP_042155865.1
Location: 3245869..3246141 (273 bp)
Type: Toxin
Protein ID: WP_042155864.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
NMG87_RS14485 (NO365_02916)3241920..3242312-393WP_227364941.1PH domain-containing protein-
NMG87_RS14490 (NO365_02917)3242284..3242688-405WP_042155868.1ribonuclease P protein component-
NMG87_RS14495 (NO365_02918)3242798..3242935-138WP_071783091.150S ribosomal protein L34-
NMG87_RS14500 (NO365_02919)3243052..3243561-510WP_026797999.1DUF2808 domain-containing protein-
NMG87_RS14505 (NO365_02920)3243897..3244139+243WP_026786216.1hypothetical protein-
NMG87_RS14510 (NO365_02922)3244263..3244910-648WP_254033714.1Uma2 family endonuclease-
NMG87_RS14515 (NO365_02923)3245101..3245442-342WP_235766172.1DUF433 domain-containing protein-
NMG87_RS14520 (NO365_02925)3245664..3245888-225WP_042155865.1CopG family antitoxinAntitoxin
NMG87_RS14525 (NO365_02926)3245869..3246141-273WP_042155864.1BrnT family toxinToxin
NMG87_RS14530 (NO365_02928)3247200..3249290+2091WP_235751906.1DUF4352 domain-containing protein-
NMG87_RS145353249357..3249494+138WP_235751905.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Ribonuclease toxin, BrnT, of type II toxin-antitoxin system

(6-81)

Antitoxin

CopG antitoxin

(3-68)


Sequences

Toxin        


Download         Length: 91 a.a.        Molecular weight: 10918.26 Da        Isoelectric Point: 7.2018

>T289973 WP_042155864.1 NZ_LR882944:c3246141-3245869 [Planktothrix agardhii]
MYSFEYDDNKSRTNQQKHGIDFIEAQQLWQDDDLLEIQATSETESRFLAIGKLKQKHWTAVITYRLENIRIISVRRSRPN
EVIWYESRRI

Download         Length: 273 bp

Antitoxin


Download         Length: 75 a.a.        Molecular weight: 8689.84 Da        Isoelectric Point: 4.4633

>AT289973 WP_042155865.1 NZ_LR882944:c3245888-3245664 [Planktothrix agardhii]
MKAEEFDAKFDTGEDLTEFMDFSTARRPNREKQKIELNLPLWMIRQLEAEAQKQGISPQTFLENYLAENLAPVR

Download         Length: 225 bp


Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBA0A1J1JEC9

Antitoxin

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Source
ID
Structure
AlphaFold DBA0A1J1JHM1

References