Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | mazEF/MazF(toxin) |
Location | 2209510..2210213 | Replicon | chromosome |
Accession | NZ_LR882498 | ||
Organism | Mycobacterium tuberculosis variant microti strain Maus III isolate human |
Toxin (Protein)
Gene name | mazF | Uniprot ID | G0TLK7 |
Locus tag | JN980_RS10100 | Protein ID | WP_003409778.1 |
Coordinates | 2209510..2209839 (-) | Length | 110 a.a. |
Antitoxin (Protein)
Gene name | mazE | Uniprot ID | G0TLK8 |
Locus tag | JN980_RS10105 | Protein ID | WP_003409780.1 |
Coordinates | 2209836..2210213 (-) | Length | 126 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
JN980_RS10080 | 2205894..2206963 | + | 1070 | Protein_1989 | epoxide hydrolase EphB | - |
JN980_RS10085 | 2206960..2207475 | + | 516 | WP_003409718.1 | flavin reductase family protein | - |
JN980_RS10090 | 2207472..2208533 | + | 1062 | WP_003899092.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
JN980_RS10095 | 2208530..2209300 | + | 771 | WP_003409775.1 | SDR family oxidoreductase | - |
JN980_RS10100 | 2209510..2209839 | - | 330 | WP_003409778.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin |
JN980_RS10105 | 2209836..2210213 | - | 378 | WP_003409780.1 | type II toxin-antitoxin system antitoxin MazE5 | Antitoxin |
JN980_RS10110 | 2210210..2210800 | - | 591 | WP_003409784.1 | SEC-C domain-containing protein | - |
JN980_RS10115 | 2210855..2212219 | + | 1365 | WP_003903691.1 | HNH endonuclease | - |
JN980_RS10120 | 2212374..2212826 | - | 453 | WP_003899095.1 | lipoprotein | - |
JN980_RS10125 | 2212890..2213291 | + | 402 | WP_003409869.1 | hypothetical protein | - |
JN980_RS10130 | 2213284..2213466 | - | 183 | WP_003409870.1 | hypothetical protein | - |
JN980_RS10135 | 2213580..2213930 | - | 351 | WP_003409871.1 | hypothetical protein | - |
JN980_RS10140 | 2213941..2214843 | - | 903 | WP_003409874.1 | hypothetical protein | - |
JN980_RS10145 | 2214864..2215055 | - | 192 | WP_003409876.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 110 a.a. Molecular weight: 11787.82 Da Isoelectric Point: 8.5361
>T289810 WP_003409778.1 NZ_LR882498:c2209839-2209510 [Mycobacterium tuberculosis variant microti]
VTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSVESVSVA
VLVNRLGRLADIRMRAICTALEVAVDCSR
VTALPARGEVWWCEMAEIGRRPVVVLSRDAAIPRLRRALVAPCTTTIRGLASEVVLEPGSDPIPRRSAVNLDSVESVSVA
VLVNRLGRLADIRMRAICTALEVAVDCSR
Download Length: 330 bp
Antitoxin
Download Length: 126 a.a. Molecular weight: 13560.07 Da Isoelectric Point: 5.1519
>AT289810 WP_003409780.1 NZ_LR882498:c2210213-2209836 [Mycobacterium tuberculosis variant microti]
VKTARLQVTLRCAVDLINSSSDQCFARIEHVASDQADPRPGVWHSSGMNRIRLSTTVDAALLTSARDMRAGITDAALIDE
ALAALLARHRSAEVDASYAAYDKHPVDEPDEWGDLASWRRAAGDS
VKTARLQVTLRCAVDLINSSSDQCFARIEHVASDQADPRPGVWHSSGMNRIRLSTTVDAALLTSARDMRAGITDAALIDE
ALAALLARHRSAEVDASYAAYDKHPVDEPDEWGDLASWRRAAGDS
Download Length: 378 bp
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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