289677

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) unclassified/Polyketide_cyc2(toxin)
Location 1017709..1018328 Replicon chromosome
Accession NZ_LR882496
Organism Mycobacterium tuberculosis variant microti strain ATCC 35782 isolate vole

Toxin (Protein)


Gene name novel[antitoxin] Uniprot ID -
Locus tag JN993_RS04775 Protein ID WP_003404726.1
Coordinates 1017894..1018328 (+) Length 145 a.a.

Antitoxin (Protein)


Gene name novel[toxin] Uniprot ID G0TFQ5
Locus tag JN993_RS04770 Protein ID WP_003404724.1
Coordinates 1017709..1017888 (+) Length 60 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JN993_RS04755 1013182..1014762 + 1581 WP_003909313.1 serine hydrolase -
JN993_RS04760 1014759..1017152 + 2394 WP_003898639.1 cation-translocating P-type ATPase -
JN993_RS04765 1017425..1017583 + 159 WP_003404720.1 hypothetical protein -
JN993_RS04770 1017709..1017888 + 180 WP_003404724.1 antitoxin Antitoxin
JN993_RS04775 1017894..1018328 + 435 WP_003404726.1 SRPBCC family protein Toxin
JN993_RS04780 1018426..1019199 + 774 WP_003404735.1 VOC family protein -
JN993_RS04785 1019264..1019713 + 450 WP_003404738.1 hypothetical protein -
JN993_RS04790 1019848..1020078 - 231 WP_003898642.1 hypothetical protein -
JN993_RS04795 1020245..1021753 - 1509 WP_003404742.1 carotenoid oxygenase family protein -
JN993_RS04800 1021755..1022993 - 1239 WP_003404744.1 acetyl-CoA acetyltransferase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Polyketide cyclase/dehydrase

(1-142)

Antitoxin

Antitoxin Rv0909/MT0933

(4-50)


Sequences

Toxin        


Download         Length: 145 a.a.        Molecular weight: 15754.47 Da        Isoelectric Point: 9.7977

>T289677 WP_003404726.1 NZ_LR882496:1017894-1018328 [Mycobacterium tuberculosis variant microti]
MAKLSGSIDVPLPPEEAWMHASDLTRYREWLTIHKVWRSKLPEVLEKGTVVESYVEVKGMPNRIKWTIVRYKPPEGMTLN
GDGVGGVKVKLIAKVAPKEHGSVVSFDVHLGGPALLGPIGMIVAAALRADIRESLQNFVTVFAG

Download         Length: 435 bp

Antitoxin


Download         Length: 60 a.a.        Molecular weight: 6394.06 Da        Isoelectric Point: 4.3059

>AT289677 WP_003404724.1 NZ_LR882496:1017709-1017888 [Mycobacterium tuberculosis variant microti]
MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLQDAASNVVGMSDQQS

Download         Length: 180 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure
AlphaFold DB G0TFQ5

References