Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | EcnAB/- |
Location | 1275883..1276248 | Replicon | chromosome |
Accession | NZ_LR828257 | ||
Organism | Xanthomonas hortorum pv. vitians strain CFBP 498 |
Toxin (Protein)
Gene name | EcnB | Uniprot ID | A0A6V7C9X4 |
Locus tag | CFBP8129_RS05290 | Protein ID | WP_074056472.1 |
Coordinates | 1276114..1276248 (+) | Length | 45 a.a. |
Antitoxin (Protein)
Gene name | EcnA | Uniprot ID | V7Z8F2 |
Locus tag | CFBP8129_RS05285 | Protein ID | WP_006451340.1 |
Coordinates | 1275883..1276035 (+) | Length | 51 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
CFBP8129_RS05260 | 1271963..1272505 | - | 543 | WP_180313759.1 | GTPase | - |
CFBP8129_RS05265 | 1272502..1273419 | - | 918 | WP_074056471.1 | hypothetical protein | - |
CFBP8129_RS05270 | 1273513..1273872 | - | 360 | WP_006452081.1 | hypothetical protein | - |
CFBP8129_RS05275 | 1273936..1274388 | - | 453 | WP_006452080.1 | roadblock/LC7 domain-containing protein | - |
CFBP8129_RS05280 | 1274850..1275773 | + | 924 | WP_095575354.1 | arginase | - |
CFBP8129_RS05285 | 1275883..1276035 | + | 153 | WP_006451340.1 | entericidin A/B family lipoprotein | Antitoxin |
CFBP8129_RS05290 | 1276114..1276248 | + | 135 | WP_074056472.1 | entericidin A/B family lipoprotein | Toxin |
CFBP8129_RS05295 | 1276490..1276699 | + | 210 | WP_006451342.1 | CsbD family protein | - |
CFBP8129_RS05300 | 1276873..1278162 | + | 1290 | WP_074056473.1 | tryptophan--tRNA ligase | - |
CFBP8129_RS05305 | 1278370..1279314 | + | 945 | WP_095575004.1 | MBL fold metallo-hydrolase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A6V7C9X4 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A2N7V051 |