289429

Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) EcnAB/-
Location 1275883..1276248 Replicon chromosome
Accession NZ_LR828257
Organism Xanthomonas hortorum pv. vitians strain CFBP 498

Toxin (Protein)


Gene name EcnB Uniprot ID A0A6V7C9X4
Locus tag CFBP8129_RS05290 Protein ID WP_074056472.1
Coordinates 1276114..1276248 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID V7Z8F2
Locus tag CFBP8129_RS05285 Protein ID WP_006451340.1
Coordinates 1275883..1276035 (+) Length 51 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CFBP8129_RS05260 1271963..1272505 - 543 WP_180313759.1 GTPase -
CFBP8129_RS05265 1272502..1273419 - 918 WP_074056471.1 hypothetical protein -
CFBP8129_RS05270 1273513..1273872 - 360 WP_006452081.1 hypothetical protein -
CFBP8129_RS05275 1273936..1274388 - 453 WP_006452080.1 roadblock/LC7 domain-containing protein -
CFBP8129_RS05280 1274850..1275773 + 924 WP_095575354.1 arginase -
CFBP8129_RS05285 1275883..1276035 + 153 WP_006451340.1 entericidin A/B family lipoprotein Antitoxin
CFBP8129_RS05290 1276114..1276248 + 135 WP_074056472.1 entericidin A/B family lipoprotein Toxin
CFBP8129_RS05295 1276490..1276699 + 210 WP_006451342.1 CsbD family protein -
CFBP8129_RS05300 1276873..1278162 + 1290 WP_074056473.1 tryptophan--tRNA ligase -
CFBP8129_RS05305 1278370..1279314 + 945 WP_095575004.1 MBL fold metallo-hydrolase -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(23-42)

Antitoxin

(23-42)


Sequences


Toxin        


Download         Length: 45 a.a.        Molecular weight: 4475.31 Da        Isoelectric Point: 9.3487

>T289429 WP_074056472.1 NZ_LR828257:1276114-1276248 [Xanthomonas hortorum pv. vitians]
MKRAIILLVLSVFSVGMLAGCNTVAGAGKDVQGAGEKVEDAARK

Download         Length: 135 bp


Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5168.11 Da        Isoelectric Point: 8.2782

>AT289429 WP_006451340.1 NZ_LR828257:1275883-1276035 [Xanthomonas hortorum pv. vitians]
MKRLLTLMVLGLFSAGVMTGCNTMAGAGKDMQGAGEKVEKKADNCSDGKC

Download         Length: 153 bp


Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A6V7C9X4


Antitoxin

Source ID Structure
AlphaFold DB A0A2N7V051

References