Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/Cpta(toxin)
Location 927684..928341 Replicon chromosome
Accession NZ_LR792628
Organism Klebsiella pneumoniae isolate SB5881

Toxin (Protein)


Gene name cptA Uniprot ID W8UCT0
Locus tag HU711_RS04590 Protein ID WP_002916310.1
Coordinates 927931..928341 (+) Length 137 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID W8UQ37
Locus tag HU711_RS04585 Protein ID WP_002916312.1
Coordinates 927684..927950 (+) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HU711_RS04560 922892..924325 - 1434 WP_002916322.1 6-phospho-beta-glucosidase BglA -
HU711_RS04565 924444..925172 - 729 WP_002916321.1 MurR/RpiR family transcriptional regulator -
HU711_RS04570 925222..925533 + 312 WP_004144734.1 N(4)-acetylcytidine aminohydrolase -
HU711_RS04575 925697..926356 + 660 WP_002916317.1 hemolysin III family protein -
HU711_RS04580 926455..927438 - 984 WP_016530681.1 tRNA-modifying protein YgfZ -
HU711_RS04585 927684..927950 + 267 WP_002916312.1 FAD assembly factor SdhE Antitoxin
HU711_RS04590 927931..928341 + 411 WP_002916310.1 protein YgfX Toxin
HU711_RS04595 928348..928869 - 522 WP_004144730.1 flavodoxin FldB -
HU711_RS04600 928970..929866 + 897 WP_046042376.1 site-specific tyrosine recombinase XerD -
HU711_RS04605 929889..930602 + 714 WP_004174456.1 bifunctional protein-disulfide isomerase/oxidoreductase DsbC -
HU711_RS04610 930608..932341 + 1734 WP_016530103.1 single-stranded-DNA-specific exonuclease RecJ -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Inner membrane protein YgfX

(3-132)

Antitoxin

Flavinator of succinate dehydrogenase

(7-79)


Sequences

Toxin        


Download         Length: 137 a.a.        Molecular weight: 16049.85 Da        Isoelectric Point: 11.4778

>T289352 WP_002916310.1 NZ_LR792628:927931-928341 [Klebsiella pneumoniae]
VVLWQSDLRISWRAQWFSLLLHGVVAALVLLVPWPLSYTPIWLLLLSLVVFDCVRSQRRIHARRGEIKLLTDSRLRWQNA
EWEILGTPWVINSGMLLRLRHVDTRRGQHLWLAADSMDAGEWRDLRRLVLQKPAQE

Download         Length: 411 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 10480.98 Da        Isoelectric Point: 5.1116

>AT289352 WP_002916312.1 NZ_LR792628:927684-927950 [Klebsiella pneumoniae]
MDINNKARIHWACRRGMRELDISIMPFFEYEYDTLSDADKQLFIRLLENDDPDLFNWLMNHGKPADAELQRMVTLIQTRN
RERGPVAI

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0H3GSW7

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GY41

References